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Author: Carlo Minotti 

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Keywords: EOSC  or ontology 


ExPaNDS Workshop - Follow a user story! A journey through the PaN data services.

The ExPaNDS Workshop "Follow a user story", which took place on the 24th of January in Hamburg, Germany (hybrid), aimed to provide a "User Journey", taking the audience on the road of the "European Open Science Cloud Photon and Neutron Data Services". The objective was to demonstrate how as...

Keywords: expands, EOSC, data services, FAIR, VISA, PaN portal

Resource type: slides, video

ExPaNDS Workshop - Follow a user story! A journey through the PaN data services. https://pan-training.eu/zenodomaterials/expands-workshop-follow-a-user-story-a-journey-through-the-pan-data-services The ExPaNDS Workshop "Follow a user story", which took place on the 24th of January in Hamburg, Germany (hybrid), aimed to provide a "User Journey", taking the audience on the road of the "European Open Science Cloud Photon and Neutron Data Services". The objective was to demonstrate how as a user, one can benefit from the services developed during the project. The story began with a FAIR journey presented by Brian Matthews, an EOSC demo from Marta Gutierrez, followed by a demo of the training platform from Oliver Knodel. The last two stops of the journey were two demos from the VISA portal (Silvan Schoen and Michael Schuh) and the search API/Harvesting services (PaN Portal, etc) presented by Carlo Minotti. The session was chaired by Clara Albert. Find the presentations & prerecorded demos on Zenodo. The recording will be available very soon. expands, EOSC, data services, FAIR, VISA, PaN portal
PaNET implementation by the pan-ontologies-API RESTful service

The application provides a data catalogue independent implementation retrieval and processing of ontologies from an external source. Currently, only the PaNET ontology is implemented. Below is a schematic data flow depicting the role of the pan-ontologies-api.

Keywords: expands, PaNOSC, data catalogue, ontology, wp3-ExPaNDS

Resource type: git, github, Git Project

PaNET implementation by the pan-ontologies-API RESTful service https://pan-training.eu/materials/pan-ontologies-api The application provides a data catalogue independent implementation retrieval and processing of ontologies from an external source. Currently, only the PaNET ontology is implemented. Below is a schematic data flow depicting the role of the pan-ontologies-api. expands, PaNOSC, data catalogue, ontology, wp3-ExPaNDS PaN Community ExPaNDS and PaNOSC project members
Develop common rules and best practices between national RI’s and harmonize the provision of the EOSC services

Slides (and other resources) of the presentations done at this workshop. How is ExPaNDS delivering its data services to PaNOSC and EOSC? - Day 1. Data catalogues: getting our open datasets harvested by the community - Day 2. Data analysis: getting our software in the PaN software...

Keywords: expands, workshop, SciCat, ICAT, B2FIND, OpenAIRE, EOSC, OAI-PMH, data catalogue, wp1-ExPaNDS

Develop common rules and best practices between national RI’s and harmonize the provision of the EOSC services https://pan-training.eu/materials/develop-common-rules-and-best-practices-between-national-ri-s-and-harmonize-the-provision-of-the-eosc-services Slides (and other resources) of the presentations done at this workshop. How is ExPaNDS delivering its data services to PaNOSC and EOSC? - Day 1. Data catalogues: getting our open datasets harvested by the community - Day 2. Data analysis: getting our software in the PaN software catalogue, getting pipelines to run, ensuring their quality over time expands, workshop, SciCat, ICAT, B2FIND, OpenAIRE, EOSC, OAI-PMH, data catalogue, wp1-ExPaNDS PaN Community ExPaNDS and PaNOSC project members
ExPaNDS mapping dcat ontology and Nexus

Different communities have developed their terminology and are maintaining their metadata schemata or lists of vocabulary. In order to facilitate sharing of data across communities and allow collaboration between heterogeneous systems, interoperability of these vocabularies is required. In ...

Keywords: expands, ontology, mapping, NeXus, DCAT, semantic integration, wp3-ExPaNDS

Resource type: git, tool

ExPaNDS mapping dcat ontology and Nexus https://pan-training.eu/materials/expands-mapping-dcat-ontology-and-nexus Different communities have developed their terminology and are maintaining their metadata schemata or lists of vocabulary. In order to facilitate sharing of data across communities and allow collaboration between heterogeneous systems, interoperability of these vocabularies is required. In order to increase data interoperability and enable data integration, these vocabularies need to be semantically integrated with other vocabularies and their terms have to be aligned. This enables the development of a common shared vocabulary. expands, ontology, mapping, NeXus, DCAT, semantic integration, wp3-ExPaNDS PaN Community
ExPaNDS NeXusOntology

NeXusOntology: Machine-readable ontology of the NeXus definitions. The published ontology describes the NeXus standard, it does not define the standard. This ontology extracts information about NeXus classes and fields from NeXus nxdl definition files on the NeXus GitHub site. This...

Keywords: NeXus, ontology, expands, wp3-ExPaNDS

Resource type: git, tool

ExPaNDS NeXusOntology https://pan-training.eu/materials/expands-nexusontology-machine-readable-ontology-of-the-nexus-definitions NeXusOntology: Machine-readable ontology of the NeXus definitions. The published ontology describes the NeXus standard, it does not define the standard. This ontology extracts information about NeXus classes and fields from NeXus nxdl definition files on the NeXus GitHub site. This project was undertaken under ExPaNDS WP3.2. The ontology is designed to fulfil several purposes. First, it creates unique identifiers for each of the NeXus fields which would normally exist only within the namespaces of the defining NeXus classes. This is the primary goal and provides PIDs for annotation and tagging. The second purpose is to allow, via separate ontologies, NeXus fields and classes to be mapped onto equivalent or related terms defined elsewhere. Finally, we hope that this ontology, when used with a tool such as Protege, will provide a useful 'NeXus Explorer' tool to gain a quick overview of NeXus with links to official NeXus documentation. NeXus, ontology, expands, wp3-ExPaNDS PaN Community
ExPaNDS Photon and Neutron Experimental Techniques (PaNET) ontology

The Photon and Neutron Experimental Technique (PaNET) ontology provides a taxonomy of experimental techniques relevant for the Photon and Neutron (PaN) community. This ontology is being developed as part of the Work Package 3 on EOSC Data Catalogue Services for PaN national Research...

Keywords: panet, expands, ontology, experimental techniques, wp3-ExPaNDS

Resource type: git, tool

ExPaNDS Photon and Neutron Experimental Techniques (PaNET) ontology https://pan-training.eu/materials/expands-photon-and-neutron-experimental-techniques-panet-ontology The Photon and Neutron Experimental Technique (PaNET) ontology provides a taxonomy of experimental techniques relevant for the Photon and Neutron (PaN) community. This ontology is being developed as part of the Work Package 3 on EOSC Data Catalogue Services for PaN national Research Infrastructures of the ExPaNDS project. The ontology allows to add semantic tags to datasets, and other related research objects, to indicate the experimental technique(s) that was (or were) used to create them. panet, expands, ontology, experimental techniques, wp3-ExPaNDS PaN Community
ExPaNDS D3.2: Ontologies v1.0

We present ontologies for the domain of photon and neutron (PaN) science. With the primary goal of supporting PaN FAIR data catalogue services, we have developed three ontologies: PaN experimental techniques (PaNET), an ontology of NeXus definitions (NeXusOntology), and a semantic integration...

Keywords: expands, ontology, EOSC, Photon science, experimental techniques, Neutron science, deliverable, D3.2, wp3-ExPaNDS

Resource type: Document

ExPaNDS D3.2: Ontologies v1.0 https://pan-training.eu/materials/expands-d3-2-ontologies We present ontologies for the domain of photon and neutron (PaN) science. With the primary goal of supporting PaN FAIR data catalogue services, we have developed three ontologies: PaN experimental techniques (PaNET), an ontology of NeXus definitions (NeXusOntology), and a semantic integration ontology for the PaN domain (PaNmapping). The ontologies are presented as initial versions, supported by community development workflows. The work represents deliverable D3.2 of the Horizon 2020 ExPaNDS project. expands, ontology, EOSC, Photon science, experimental techniques, Neutron science, deliverable, D3.2, wp3-ExPaNDS