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Keywords: synchrotron 

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Difficulty level: Medium 

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Content provider: ALBA  or Paul Scherrer Institute (PSI)  or Central European Research I... 


Full-field Tomography at PSI

This workflow has some details on the instrument the data is produced from (TOMCAT beamline) and the infrastructure PSI has concerning their data. If you are more interested in the science and want to reproduce the data and not bother with the surrounding details/context, please refer to the...

Keywords: synchrotron, imaging, Jupyter notebooks, Python, Pulmonary arterial hypertension

Resource type: workflow

Full-field Tomography at PSI https://pan-training.eu/materials/full-field-tomography-at-psi This workflow has some details on the instrument the data is produced from (TOMCAT beamline) and the infrastructure PSI has concerning their data. If you are more interested in the science and want to reproduce the data and not bother with the surrounding details/context, please refer to the Pulmonary arterial hypertension research workflow. Full-field Tomography at PSI Tomography datasets often present large volumes (100 GBs - few TBs) difficult to compress and transfer. The tomographic reconstruction is highly demanding on compute (GPU) and storage resources for the intermediate and/or final result. In addition, the optional image segmentation step may be demanding on computer memory. The offline analysis (after experiment) could be performed remotely by users at home making it attractive for deployment as a cloud-like use case. Finally, this technique is applied at many facilities and in different scientific domains - therefore a portable result is more useful. This entire process is illustrated with a typical experiment. synchrotron, imaging, Jupyter notebooks, Python, Pulmonary arterial hypertension research data scientist life scientists
Introduction to Soft X-ray Transmission and Emission Microscope, TwinMic at Elettra Sincrotrone Trieste

Introduction to the TwinMic Beamline: Soft X-ray Transmission and Emission Microscope at the CERIC Italian partner facility, Elettra Sincrotrone Trieste ---TwinMic beamline webpage in the CERIC website:...

Keywords: soft X-ray Microscopy, synchrotron, Central European Research Infrastructure Consortium, CERIC, synchrotron beamline, microscopy, electrochemistry, battery research, Heritage Science, Elettra synchrotron, Elettra Sincrotrone Trieste, life sciences, microscope

Resource type: video

Introduction to Soft X-ray Transmission and Emission Microscope, TwinMic at Elettra Sincrotrone Trieste https://pan-training.eu/materials/introduction-to-soft-x-ray-transmission-and-emission-microscope-twinmic-at-elettra-sincrotrone-trieste Introduction to the TwinMic Beamline: Soft X-ray Transmission and Emission Microscope at the CERIC Italian partner facility, Elettra Sincrotrone Trieste ---TwinMic beamline webpage in the CERIC website: https://www.ceric-eric.eu/lab-instrument/soft-x-ray-transmission-and-emission-microscope/ ---TwinMic beamline webpage in the Elettra website: https://www.elettra.trieste.it/elettra-beamlines/twinmic.html soft X-ray Microscopy, synchrotron, Central European Research Infrastructure Consortium, CERIC, synchrotron beamline, microscopy, electrochemistry, battery research, Heritage Science, Elettra synchrotron, Elettra Sincrotrone Trieste, life sciences, microscope researchers scientists PhD students chemists physicists biologists