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2 materials found

Language: English 

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Keywords: synchrotron  or UmbrellaID 

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Content provider: ALBA  or Paul Scherrer Institute (PSI) 


UmbrellaID Workshop: Keycloak

This one day training is dedicated to the PaN community IT people that want to enable community AAI for their users. At the end of the training it is expected that you understand what UmbrellaID and the EOSC AAI federation is. A hands on session shall demonstrate how to integrate your services...

Keywords: UmbrellaID

Resource type: slides, video

UmbrellaID Workshop: Keycloak https://pan-training.eu/materials/umbrellaid-workshop-keycloak This one day training is dedicated to the PaN community IT people that want to enable community AAI for their users. At the end of the training it is expected that you understand what UmbrellaID and the EOSC AAI federation is. A hands on session shall demonstrate how to integrate your services with UmbrellaID using Keycloak. If you want to actively participate in the hands on session, you need to have your own Keycloak installation, see the following checklist. If you don't have that, you can still participate in the workshop and also take part in the hands on session as an observer. Checklist for the hands on session: - An installation of Keycloak - Internet access from the host where they have installed Keycloak (ideally direct access, but HTTP proxy and reverse HTTP proxy are also valid) - DNS resolution for the host with Keycloak installed should be in place and should be identical from everywhere (I.E. the machine should be referenced with the same domain name from the RI/lab intranet and public internet network) - A valid X509 server certificate The session recordings can be found here: 1. https://umbrellaid.org/zoom/2022-05-03-UmbrellaID-Workshop-Session-1.mp4 2. https://umbrellaid.org/zoom/2022-05-03-UmbrellaID-Workshop-Session-2.mp4 UmbrellaID PaN Community
Full-field Tomography at PSI

This workflow has some details on the instrument the data is produced from (TOMCAT beamline) and the infrastructure PSI has concerning their data. If you are more interested in the science and want to reproduce the data and not bother with the surrounding details/context, please refer to the...

Keywords: synchrotron, imaging, Jupyter notebooks, Python, Pulmonary arterial hypertension

Resource type: workflow

Full-field Tomography at PSI https://pan-training.eu/materials/full-field-tomography-at-psi This workflow has some details on the instrument the data is produced from (TOMCAT beamline) and the infrastructure PSI has concerning their data. If you are more interested in the science and want to reproduce the data and not bother with the surrounding details/context, please refer to the Pulmonary arterial hypertension research workflow. Full-field Tomography at PSI Tomography datasets often present large volumes (100 GBs - few TBs) difficult to compress and transfer. The tomographic reconstruction is highly demanding on compute (GPU) and storage resources for the intermediate and/or final result. In addition, the optional image segmentation step may be demanding on computer memory. The offline analysis (after experiment) could be performed remotely by users at home making it attractive for deployment as a cloud-like use case. Finally, this technique is applied at many facilities and in different scientific domains - therefore a portable result is more useful. This entire process is illustrated with a typical experiment. synchrotron, imaging, Jupyter notebooks, Python, Pulmonary arterial hypertension research data scientist life scientists