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Content provider: Deutsches Elektronen-Synchr... 

Video introduction to data management plans for PaN users

Video guide illustrating the essential steps of creating a data management plan for an experiment.

Keywords: data management, DMP

Resource type: video

Video introduction to data management plans for PaN users https://pan-training.eu/materials/video-introduction-to-data-management-plans-for-pan-users Video guide illustrating the essential steps of creating a data management plan for an experiment. data management, DMP PaN users researchers
Tutorials for Nexus - Nuclear Elastic X-ray scattering Universal Software

Tutorials for the software package Nexus. The Nuclear Elastic X-ray scattering Universal Software (Nexus) is a Python package for simulating and fitting of Moessbauer spectra, nuclear resonant scattering (NRS) data, pure electronic X-ray reflectivities (XRR), nuclear X-ray reflectivities (nXRR),...

Scientific topics: nuclear resonant scattering, resonant scattering

Tutorials for Nexus - Nuclear Elastic X-ray scattering Universal Software https://pan-training.eu/materials/tutorials-for-nexus-nuclear-elastic-x-ray-scattering-universal-software Tutorials for the software package Nexus. The Nuclear Elastic X-ray scattering Universal Software (Nexus) is a Python package for simulating and fitting of Moessbauer spectra, nuclear resonant scattering (NRS) data, pure electronic X-ray reflectivities (XRR), nuclear X-ray reflectivities (nXRR), and polarization dependent electronic scattering. nuclear resonant scattering resonant scattering
Nexus - Nuclear Elastic X-ray scattering Universal Software

Repositroy for the Nexus. The Nuclear Elastic X-ray scattering Universal Software (Nexus) is a Python package for simulating and fitting of Moessbauer spectra, nuclear resonant scattering (NRS) data, pure electronic X-ray reflectivities (XRR), nuclear X-ray reflectivities (nXRR), and polarization...

Scientific topics: nuclear resonant scattering, reflectometry, polarimetry

Keywords: Nuclear Physics, Mossbauer spectroscopy, Nuclear resonant scattering

Resource type: software

Nexus - Nuclear Elastic X-ray scattering Universal Software https://pan-training.eu/materials/nexus-nuclear-elastic-x-ray-scattering-universal-software Repositroy for the Nexus. The Nuclear Elastic X-ray scattering Universal Software (Nexus) is a Python package for simulating and fitting of Moessbauer spectra, nuclear resonant scattering (NRS) data, pure electronic X-ray reflectivities (XRR), nuclear X-ray reflectivities (nXRR), and polarization dependent electronic scattering. nuclear resonant scattering reflectometry polarimetry Nuclear Physics, Mossbauer spectroscopy, Nuclear resonant scattering researchers scientists
Containerized Serial Crystallography “CrystFEL” VISA workflow

Experiments generate up to 150 TB per day of data saved at the measurement facility. Such large datasets are impractical for users to take home. Subsequent analysis needs to be performed remotely making it attractive for deployment as a cloud-like use case. Involving EOSC in the analysis and...

Scientific topics: crystallography

Keywords: CrystFEL, Serial crystallography, pulsed X-ray beam, VISA

Resource type: workflow

Containerized Serial Crystallography “CrystFEL” VISA workflow https://pan-training.eu/materials/containerized-serial-crystallography-crystfel-visa-workflow Experiments generate up to 150 TB per day of data saved at the measurement facility. Such large datasets are impractical for users to take home. Subsequent analysis needs to be performed remotely making it attractive for deployment as a cloud-like use case. Involving EOSC in the analysis and re-use of this data is an appropriate use case. Serial crystallography is a beam-line technique for collecting information on the structure of a protein without growing large protein crystals. Instead, a large number of small protein crystals are held in a pulsed X-ray beam. In a second step, the series of produced images are used to reconstruct a precise 3-D image of the protein structure. Serial crystallography is the preferred technique for obtaining diffraction data of proteins at room temperature, where radiation damage from the X-ray beam starts rapidly. The standard software for analysing serial crystallography is “CrystFEL”. The proposed workflow was rendered in a standard fashion, which would allow it to be easily adopted by arbitrary systems or also other containerized applications. The only requirements are an Apptainer installation on the system and a Docker or Singularity/Apptainer image of the application, as well as an adjustment of the configuration file for the wrapper script. crystallography CrystFEL, Serial crystallography, pulsed X-ray beam, VISA research data scientist scientific
CrystFEL tutorial

This tutorial covers most of the main steps of using CrystFEL, and is based on processing some freely available LCLS data. The aim of this page is to give an overall idea of how the programs fit together and equip you with the knowledge you need to get started with processing a serial...

Keywords: CrystFEL, data processing, crystallography, structural biology

Resource type: tutorial

CrystFEL tutorial https://pan-training.eu/materials/crystfel-tutorial This tutorial covers most of the main steps of using CrystFEL, and is based on processing some freely available LCLS data. The aim of this page is to give an overall idea of how the programs fit together and equip you with the knowledge you need to get started with processing a serial crystallography data set on your own. CrystFEL, data processing, crystallography, structural biology Photon Community crystallography