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Keywords: Photon science  or wp3-ExPaNDS 

Joint Public Session ExPaNDS/PaNOSC on metadata catalogues (SciCat implementation) and future perspectives

Presentations from public joint WP3 Meeting for ExPaNDS and PaNOSC, which took place in hybrid format from SOLEIL (France) and via Zoom on the 3rd November 2022. A recording of the event can be found on the ExPaNDS website: https://expands.eu/presentations/ Video recording (direct link to...

Keywords: expands, PaNOSC, open data, wp3-ExPaNDS

Resource type: slides

Joint Public Session ExPaNDS/PaNOSC on metadata catalogues (SciCat implementation) and future perspectives https://pan-training.eu/materials/work-package-3-public-meeting Presentations from public joint WP3 Meeting for ExPaNDS and PaNOSC, which took place in hybrid format from SOLEIL (France) and via Zoom on the 3rd November 2022. A recording of the event can be found on the ExPaNDS website: https://expands.eu/presentations/ Video recording (direct link to vimeo) will be available soon. expands, PaNOSC, open data, wp3-ExPaNDS data managers
Workshop on Metadata Catalogues

Presentations from the Workshop on Metadata Catalogues, which took place virtually via Zoom on the 4th April 2022.

Keywords: data catalogue, SciCat, ICAT, expands, panet, PaNOSC, metadata, data management, data processing, wp3-ExPaNDS

Resource type: slides, video

Workshop on Metadata Catalogues https://pan-training.eu/materials/workshop-on-metadata-catalogues Presentations from the Workshop on Metadata Catalogues, which took place virtually via Zoom on the 4th April 2022. data catalogue, SciCat, ICAT, expands, panet, PaNOSC, metadata, data management, data processing, wp3-ExPaNDS data curator data managers research data engineer ExPaNDS and PaNOSC project members PaN users PaN Community
Report on status, gap analysis and roadmap towards harmonised and federated metadata catalogues for EU national Photon and Neutron RIs

Report on status, gap analysis and roadmap towards harmonised and federated metadata catalogues for EU national Photon and Neutron RIs

Keywords: expands, D3.1, wp3-ExPaNDS

Resource type: Document

Report on status, gap analysis and roadmap towards harmonised and federated metadata catalogues for EU national Photon and Neutron RIs https://pan-training.eu/materials/report-on-status-gap-analysis-and-roadmap-towards-harmonised-and-federated-metadata-catalogues-for-eu-national-photon-and-neutron-ris Report on status, gap analysis and roadmap towards harmonised and federated metadata catalogues for EU national Photon and Neutron RIs expands, D3.1, wp3-ExPaNDS ExPaNDS and PaNOSC project members
Common search API definition

This document summarises the development of a common search API achieved in the PaNOSC Work Package 3. It explains the rationale behind the development and many of the decisions made as well as the general process that was followed.

Keywords: PaNOSC, expands, SciCat, ICAT, wp3-ExPaNDS

Resource type: Document

Common search API definition https://pan-training.eu/materials/common-search-api-definition This document summarises the development of a common search API achieved in the PaNOSC Work Package 3. It explains the rationale behind the development and many of the decisions made as well as the general process that was followed. PaNOSC, expands, SciCat, ICAT, wp3-ExPaNDS PaN Community ExPaNDS and PaNOSC project members engineers research data engineer data managers data curator
Demonstrate ICAT and SciCat released with APIs compatible with ExPaNDS federated EOSC services

Demonstration release of ICAT and SciCat with APIs compatible with ExPaNDS federated EOSC services and its connection to milestone Metadata catalogue as EOSC service in the domain of photon and neutron (PaN) science

Keywords: D3.3, wp3-ExPaNDS

Demonstrate ICAT and SciCat released with APIs compatible with ExPaNDS federated EOSC services https://pan-training.eu/materials/demonstrate-icat-and-scicat-released-with-apis-compatible-with-expands-federated-eosc-services Demonstration release of ICAT and SciCat with APIs compatible with ExPaNDS federated EOSC services and its connection to milestone Metadata catalogue as EOSC service in the domain of photon and neutron (PaN) science D3.3, wp3-ExPaNDS
DAPHNE4NFDI: Science driven data management solutions for the user community

Slides (and other resources) of the presentations done at this workshop, including a presentation of ICAT and SciCat.

Keywords: ICAT, SciCat, PaNOSC, expands, wp3-ExPaNDS

Resource type: slides

DAPHNE4NFDI: Science driven data management solutions for the user community https://pan-training.eu/materials/daphne4nfdi-science-driven-data-management-solutions-for-the-user-community Slides (and other resources) of the presentations done at this workshop, including a presentation of ICAT and SciCat. ICAT, SciCat, PaNOSC, expands, wp3-ExPaNDS PaN Community ExPaNDS and PaNOSC project members PaN users data curator data managers research data engineer engineers
PaNET implementation by the pan-ontologies-API RESTful service

The application provides a data catalogue independent implementation retrieval and processing of ontologies from an external source. Currently, only the PaNET ontology is implemented. Below is a schematic data flow depicting the role of the pan-ontologies-api.

Keywords: expands, PaNOSC, data catalogue, ontology, wp3-ExPaNDS

Resource type: git, github, Git Project

PaNET implementation by the pan-ontologies-API RESTful service https://pan-training.eu/materials/pan-ontologies-api The application provides a data catalogue independent implementation retrieval and processing of ontologies from an external source. Currently, only the PaNET ontology is implemented. Below is a schematic data flow depicting the role of the pan-ontologies-api. expands, PaNOSC, data catalogue, ontology, wp3-ExPaNDS PaN Community ExPaNDS and PaNOSC project members
Introduction to SAXS/SANS (Small-Angle X-ray Scattering/ Small-Angle Neutron Scattering)

Introduction to SAXS/SANS (Small-Angle X-ray Scattering/ Small-Angle Neutron Scattering) by Dr. Heinz Amenitsch from CERIC’s Austrian Partner Facility, Technical University Graz

Keywords: SAXS, SANS, Small-Angle X-ray scattering, Small-Angle Neutron Scattering, Photon science, neutron research, Neutron scattering, x-ray scattering

Resource type: video

Introduction to SAXS/SANS (Small-Angle X-ray Scattering/ Small-Angle Neutron Scattering) https://pan-training.eu/materials/introduction-to-saxs-sans-small-angle-x-ray-scattering-small-angle-neutron-scattering Introduction to SAXS/SANS (Small-Angle X-ray Scattering/ Small-Angle Neutron Scattering) by Dr. Heinz Amenitsch from CERIC’s Austrian Partner Facility, Technical University Graz SAXS, SANS, Small-Angle X-ray scattering, Small-Angle Neutron Scattering, Photon science, neutron research, Neutron scattering, x-ray scattering PaN users PaN Community PhD students
FTIR Microscopy with Synchrotron Radiation

FTIR Microscopy with Synchrotron Radiation by Dr. Lisa Vaccari from CERIC’s Italian Partner Facility, Elettra Synchrotron in Trieste

Keywords: synchrotron, Elettra synchrotron, synchrotron beamline, FTIR Microscopy, Photon science

Resource type: video

FTIR Microscopy with Synchrotron Radiation https://pan-training.eu/materials/ftir-microscopy-with-synchrotron-radiation FTIR Microscopy with Synchrotron Radiation by Dr. Lisa Vaccari from CERIC’s Italian Partner Facility, Elettra Synchrotron in Trieste synchrotron, Elettra synchrotron, synchrotron beamline, FTIR Microscopy, Photon science PaN Community PaN users PhD students
Soft X-ray Imaging and XRF

Soft X-ray Imaging and XRF by Dr. Alessandra Gianoncelli from CERIC’s Italian Partner Facility, Elettra Synchrotron in Trieste

Keywords: Soft X-ray Imaging, X-ray fluorescence, XRF, synchrotron, synchrotron beamline, Elettra synchrotron, Photon science

Resource type: video

Soft X-ray Imaging and XRF https://pan-training.eu/materials/soft-x-ray-imaging-and-xrf Soft X-ray Imaging and XRF by Dr. Alessandra Gianoncelli from CERIC’s Italian Partner Facility, Elettra Synchrotron in Trieste Soft X-ray Imaging, X-ray fluorescence, XRF, synchrotron, synchrotron beamline, Elettra synchrotron, Photon science PaN Community PaN users PhD students
Introduction to Powder Diffraction

Introduction to Powder Diffraction by Dr. Jasper Plaisier from CERIC’s Italian Partner Facility, Elettra Synchrotron in Trieste

Scientific topics: powder diffraction

Keywords: Powder Diffraction, synchrotron, Photon science, synchrotron beamline, Elettra synchrotron

Resource type: video

Introduction to Powder Diffraction https://pan-training.eu/materials/introduction-to-powder-diffraction Introduction to Powder Diffraction by Dr. Jasper Plaisier from CERIC’s Italian Partner Facility, Elettra Synchrotron in Trieste powder diffraction Powder Diffraction, synchrotron, Photon science, synchrotron beamline, Elettra synchrotron PaN Community PaN users PhD students
X-ray Diffraction: Macromolecular Crystallography

X-ray Diffraction: Macromolecular Crystallography by Dr. Annie Heroux from CERIC’s Italian Partner Facility, Elettra Synchrotron in Trieste

Keywords: X-ray Diffraction, Macromolecular Crystallography, synchrotron, Photon science, synchrotron beamline, Elettra synchrotron

X-ray Diffraction: Macromolecular Crystallography https://pan-training.eu/materials/x-ray-diffraction-macromolecular-crystallography X-ray Diffraction: Macromolecular Crystallography by Dr. Annie Heroux from CERIC’s Italian Partner Facility, Elettra Synchrotron in Trieste X-ray Diffraction, Macromolecular Crystallography, synchrotron, Photon science, synchrotron beamline, Elettra synchrotron PaN Community PaN users PhD students
Introduction to X-ray Imaging

Introduction to X-ray Imaging by Dr. Giuliana Tromba from CERIC’s Italian Partner Facility, Elettra Synchrotron in Trieste

Scientific topics: x-ray imaging

Keywords: X-ray Imaging, Photon science, synchrotron, synchrotron beamline, Elettra synchrotron

Resource type: video

Introduction to X-ray Imaging https://pan-training.eu/materials/introduction-to-x-ray-imaging Introduction to X-ray Imaging by Dr. Giuliana Tromba from CERIC’s Italian Partner Facility, Elettra Synchrotron in Trieste x-ray imaging X-ray Imaging, Photon science, synchrotron, synchrotron beamline, Elettra synchrotron PaN users PaN Community PhD students
Introduction to X-ray Spectroscopy & Microscopy

Introduction to X-ray Spectroscopy & Microscopy by Dr. Andrea Locatelli from CERIC’s Italian Partner Facility, Elettra Synchrotron in Trieste

Keywords: X-ray Spectroscopy, X-ray Microscopy, Photon science, synchrotron, synchrotron beamline, Elettra synchrotron

Resource type: video

Introduction to X-ray Spectroscopy & Microscopy https://pan-training.eu/materials/introduction-to-x-ray-spectroscopy-microscopy Introduction to X-ray Spectroscopy & Microscopy by Dr. Andrea Locatelli from CERIC’s Italian Partner Facility, Elettra Synchrotron in Trieste X-ray Spectroscopy, X-ray Microscopy, Photon science, synchrotron, synchrotron beamline, Elettra synchrotron PaN users PaN Community PhD students
Introduction to X/N Matter Interactions

Introduction to X/N Matter Interactions by Dr. Maya Kisknova from CERIC’s Italian Partner Facility, Elettra Synchrotron in Trieste

Keywords: synchrotron, Elettra synchrotron, Photon science

Resource type: video

Introduction to X/N Matter Interactions https://pan-training.eu/materials/introduction-to-x-n-matter-interactions Introduction to X/N Matter Interactions by Dr. Maya Kisknova from CERIC’s Italian Partner Facility, Elettra Synchrotron in Trieste synchrotron, Elettra synchrotron, Photon science PaN Community PaN users PhD students
Metadata Catalogue Release

Self-contained, stand-alone metadata catalogue release that facilities can download to test/try and play with.

Keywords: ICAT, SciCat, PaNOSC, data catalogue, expands, wp3-ExPaNDS

Resource type: docker, docker-compose, software, git

Metadata Catalogue Release https://pan-training.eu/materials/metadata-catalogue-release Self-contained, stand-alone metadata catalogue release that facilities can download to test/try and play with. ICAT, SciCat, PaNOSC, data catalogue, expands, wp3-ExPaNDS PaN Community ExPaNDS and PaNOSC project members engineers research data engineer
ExPaNDS mapping dcat ontology and Nexus

Different communities have developed their terminology and are maintaining their metadata schemata or lists of vocabulary. In order to facilitate sharing of data across communities and allow collaboration between heterogeneous systems, interoperability of these vocabularies is required. In ...

Keywords: expands, ontology, mapping, NeXus, DCAT, semantic integration, wp3-ExPaNDS

Resource type: git, tool

ExPaNDS mapping dcat ontology and Nexus https://pan-training.eu/materials/expands-mapping-dcat-ontology-and-nexus Different communities have developed their terminology and are maintaining their metadata schemata or lists of vocabulary. In order to facilitate sharing of data across communities and allow collaboration between heterogeneous systems, interoperability of these vocabularies is required. In order to increase data interoperability and enable data integration, these vocabularies need to be semantically integrated with other vocabularies and their terms have to be aligned. This enables the development of a common shared vocabulary. expands, ontology, mapping, NeXus, DCAT, semantic integration, wp3-ExPaNDS PaN Community
ExPaNDS NeXusOntology

NeXusOntology: Machine-readable ontology of the NeXus definitions. The published ontology describes the NeXus standard, it does not define the standard. This ontology extracts information about NeXus classes and fields from NeXus nxdl definition files on the NeXus GitHub site. This...

Keywords: NeXus, ontology, expands, wp3-ExPaNDS

Resource type: git, tool

ExPaNDS NeXusOntology https://pan-training.eu/materials/expands-nexusontology-machine-readable-ontology-of-the-nexus-definitions NeXusOntology: Machine-readable ontology of the NeXus definitions. The published ontology describes the NeXus standard, it does not define the standard. This ontology extracts information about NeXus classes and fields from NeXus nxdl definition files on the NeXus GitHub site. This project was undertaken under ExPaNDS WP3.2. The ontology is designed to fulfil several purposes. First, it creates unique identifiers for each of the NeXus fields which would normally exist only within the namespaces of the defining NeXus classes. This is the primary goal and provides PIDs for annotation and tagging. The second purpose is to allow, via separate ontologies, NeXus fields and classes to be mapped onto equivalent or related terms defined elsewhere. Finally, we hope that this ontology, when used with a tool such as Protege, will provide a useful 'NeXus Explorer' tool to gain a quick overview of NeXus with links to official NeXus documentation. NeXus, ontology, expands, wp3-ExPaNDS PaN Community
ExPaNDS Photon and Neutron Experimental Techniques (PaNET) ontology

The Photon and Neutron Experimental Technique (PaNET) ontology provides a taxonomy of experimental techniques relevant for the Photon and Neutron (PaN) community. This ontology is being developed as part of the Work Package 3 on EOSC Data Catalogue Services for PaN national Research...

Keywords: panet, expands, ontology, experimental techniques, wp3-ExPaNDS

Resource type: git, tool

ExPaNDS Photon and Neutron Experimental Techniques (PaNET) ontology https://pan-training.eu/materials/expands-photon-and-neutron-experimental-techniques-panet-ontology The Photon and Neutron Experimental Technique (PaNET) ontology provides a taxonomy of experimental techniques relevant for the Photon and Neutron (PaN) community. This ontology is being developed as part of the Work Package 3 on EOSC Data Catalogue Services for PaN national Research Infrastructures of the ExPaNDS project. The ontology allows to add semantic tags to datasets, and other related research objects, to indicate the experimental technique(s) that was (or were) used to create them. panet, expands, ontology, experimental techniques, wp3-ExPaNDS PaN Community
ExPaNDS D3.2: Ontologies v1.0

We present ontologies for the domain of photon and neutron (PaN) science. With the primary goal of supporting PaN FAIR data catalogue services, we have developed three ontologies: PaN experimental techniques (PaNET), an ontology of NeXus definitions (NeXusOntology), and a semantic integration...

Keywords: expands, ontology, EOSC, Photon science, experimental techniques, Neutron science, deliverable, D3.2, wp3-ExPaNDS

Resource type: Document

ExPaNDS D3.2: Ontologies v1.0 https://pan-training.eu/materials/expands-d3-2-ontologies We present ontologies for the domain of photon and neutron (PaN) science. With the primary goal of supporting PaN FAIR data catalogue services, we have developed three ontologies: PaN experimental techniques (PaNET), an ontology of NeXus definitions (NeXusOntology), and a semantic integration ontology for the PaN domain (PaNmapping). The ontologies are presented as initial versions, supported by community development workflows. The work represents deliverable D3.2 of the Horizon 2020 ExPaNDS project. expands, ontology, EOSC, Photon science, experimental techniques, Neutron science, deliverable, D3.2, wp3-ExPaNDS
Delivering data services to EOSC

Wiki page recording the ExPaNDS training workshop on data services for EOSC (06/04/2021)

Keywords: OAI-PMH, metadata, harvesting, SciCat, ICAT, B2FIND, OpenAIRE, research data, wp3-ExPaNDS

Resource type: wiki

Delivering data services to EOSC https://pan-training.eu/materials/delivering-data-services-to-eosc Wiki page recording the ExPaNDS training workshop on data services for EOSC (06/04/2021) OAI-PMH, metadata, harvesting, SciCat, ICAT, B2FIND, OpenAIRE, research data, wp3-ExPaNDS data curator research data scientist