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Resource type: github  or jupyter notebook  or community site 


Ewoks tutorial for developers

Learn how to create and execute workflows with Ewoks

Keywords: Ewoks, workflows, tutorial

Resource type: jupyter notebook

Ewoks tutorial for developers https://pan-training.eu/materials/ewoks-tutorial-for-developers Learn how to create and execute workflows with Ewoks Ewoks, workflows, tutorial software developers
Offline data analysis tutorial

Tutorial on European XFEL offline data analysis as per example of MID instrument data

Scientific topics: small angle x-ray scattering

Keywords: Extra-data, Extra-geom, pyFAI, data analysis

Resource type: jupyter notebook

Offline data analysis tutorial https://pan-training.eu/materials/offline-analysis-tutorial Tutorial on European XFEL offline data analysis as per example of MID instrument data small angle x-ray scattering Extra-data, Extra-geom, pyFAI, data analysis PaN users beamline users research data scientist
Jupyter notebooks on Machine Learning for scientific data analysis

Jupyter Notebooks serving as supplementary material for a tutorial on Machine Learning, originally presented at the 2022 European XFEL user meeting.

Resource type: jupyter notebook

Jupyter notebooks on Machine Learning for scientific data analysis https://pan-training.eu/materials/jupyter-notebooks-on-machine-learning-for-scientific-data-analysis Jupyter Notebooks serving as supplementary material for a tutorial on Machine Learning, originally presented at the 2022 European XFEL user meeting. research data scientist PhD students masters students
XAFS, EXAFS, and XANES tutorials

xafs.xrayabsorption.org (also xafs.org) is a community site for x-ray absorption fine-structure (XAFS) and related spectroscopies. It is part of the web pages sponsored by the International XAFS Society, https://xrayabsorption.org/.

Scientific topics: extended x-ray absorption fine structure, x-ray absorption fine structure, x-ray absorption near edge structure

Keywords: xanes & exafs, xafs, exafs, xanes

Resource type: community site

XAFS, EXAFS, and XANES tutorials https://pan-training.eu/materials/xafs-exafs-and-xanes-tutorials xafs.xrayabsorption.org (also xafs.org) is a community site for x-ray absorption fine-structure (XAFS) and related spectroscopies. It is part of the web pages sponsored by the International XAFS Society, https://xrayabsorption.org/. extended x-ray absorption fine structure x-ray absorption fine structure x-ray absorption near edge structure xanes & exafs, xafs, exafs, xanes
JupyLabBook

A Jupyter Notebook used as an interactive lab book on the beamline SIRIUS (SOLEIL Synchrotron).

Keywords: labbook, jupyter notebook, SIRIUS beamline

Resource type: git, jupyter notebook

JupyLabBook https://pan-training.eu/materials/jupylabbook A Jupyter Notebook used as an interactive lab book on the beamline SIRIUS (SOLEIL Synchrotron). labbook, jupyter notebook, SIRIUS beamline
JupyFluo

JupyFluo is a Jupyter Notebook to analyze X-Ray Fluorescence (XRF) experiments on the beamline SIRIUS at the synchrotron SOLEIL. The notebook should be first set up by an Expert following the instructions in the "Expert" section. User can then follow the guidelines in the "User" section to start...

Scientific topics: x-ray fluorescence

Keywords: X-ray fluorescence, jupyter notebook, SIRIUS beamline

Resource type: git, jupyter notebook

JupyFluo https://pan-training.eu/materials/jupyfluo JupyFluo is a Jupyter Notebook to analyze X-Ray Fluorescence (XRF) experiments on the beamline SIRIUS at the synchrotron SOLEIL. The notebook should be first set up by an Expert following the instructions in the "Expert" section. User can then follow the guidelines in the "User" section to start using the notebook. Please note that the notebook is currently in development. As such, be skeptical about any unexpected results. Any feedback on the notebook or the code is welcome. x-ray fluorescence X-ray fluorescence, jupyter notebook, SIRIUS beamline
How to read/edit a nexus file using h5py

A tutorial notebook on how to read and edit a nexus file using h5py.

Keywords: NeXus

Resource type: git, jupyter notebook

How to read/edit a nexus file using h5py https://pan-training.eu/materials/how-to-read-edit-a-nexus-file-using-h5py A tutorial notebook on how to read and edit a nexus file using h5py. NeXus
GenX tutorial

howto_batch The notebook batch_genx.ipynb details the different steps on how to use GenX with command lines. The aim is to batch fits for XRR without the GUI. To do so we edit the .hgx files, which are just hdf5 files. The script batch_genx.py is a condensed script without all the details...

Scientific topics: x-ray reflectivity

Keywords: GenX, jupyter notebook, XRR

Resource type: git, jupyter notebook

GenX tutorial https://pan-training.eu/materials/genx-tutorial howto_batch The notebook batch_genx.ipynb details the different steps on how to use GenX with command lines. The aim is to batch fits for XRR without the GUI. To do so we edit the .hgx files, which are just hdf5 files. The script batch_genx.py is a condensed script without all the details from the notebook. howto_parameters Explains what are the different parameters in the GUI. x-ray reflectivity GenX, jupyter notebook, XRR
PaNOSC search scoring

It illustrates how the Scoring service is designed, how to deploy it and integrate it with the local data catalogue system and the PaN Search api

Keywords: expands, PaNOSC, scoring

Resource type: github

PaNOSC search scoring https://pan-training.eu/materials/panosc-search-scoring It illustrates how the Scoring service is designed, how to deploy it and integrate it with the local data catalogue system and the PaN Search api expands, PaNOSC, scoring PaN Community ExPaNDS and PaNOSC project members data curator data managers research data engineer
PaNET implementation by the pan-ontologies-API RESTful service

The application provides a data catalogue independent implementation retrieval and processing of ontologies from an external source. Currently, only the PaNET ontology is implemented. Below is a schematic data flow depicting the role of the pan-ontologies-api.

Keywords: expands, PaNOSC, data catalogue, ontology, wp3-ExPaNDS

Resource type: git, github, Git Project

PaNET implementation by the pan-ontologies-API RESTful service https://pan-training.eu/materials/pan-ontologies-api The application provides a data catalogue independent implementation retrieval and processing of ontologies from an external source. Currently, only the PaNET ontology is implemented. Below is a schematic data flow depicting the role of the pan-ontologies-api. expands, PaNOSC, data catalogue, ontology, wp3-ExPaNDS PaN Community ExPaNDS and PaNOSC project members