PaN Training

Filter Clear filters
- Scientific topic
- FAIR data134
- Findable, accessible, interoperable, reusable data134
- Data management88
- Metadata management88
- Research data management (RDM)88
- Python69
- Python program69
- Python script69
- py69
- Bioinformatics30
- Biodiversity26
- Data mining20
- Pattern recognition20
- Active learning18
- Ensembl learning18
- Kernel methods18
- Knowledge representation18
- Machine learning18
- Neural networks18
- Recommender system18
- Reinforcement learning18
- Supervised learning18
- Unsupervised learning18
- Cloud computing15
- Computer science15
- HPC15
- High performance computing15
- High-performance computing15
- Data rendering14
- Data visualisation14
- Biomedical informatics12
- Clinical informatics12
- Health and disease12
- Health informatics12
- Healthcare informatics12
- Medical informatics12
- Bayesian methods9
- Biostatistics9
- Descriptive statistics9
- Gaussian processes9
- Inferential statistics9
- Markov processes9
- Multivariate statistics9
- Probabilistic graphical model9
- Probability9
- Statistics9
- Statistics and probability9
- MicroRNA sequencing8
- RNA sequencing8
- RNA-Seq8
- RNA-Seq analysis8
- Small RNA sequencing8
- Small RNA-Seq8
- Small-Seq8
- Transcriptome profiling8
- WTSS8
- Whole transcriptome shotgun sequencing8
- miRNA-seq8
- Comparative transcriptomics7
- Transcriptome7
- Transcriptomics7
- Open science6
- R6
- R program6
- R script6
- Chromosome walking5
- Clone verification5
- DNA-Seq5
- DNase-Seq5
- Data archival5
- Data archiving5
- Data curation5
- Data curation and archival5
- Data preservation5
- Database curation5
- Exomes5
- Genome annotation5
- Genomes5
- Genomics5
- High throughput sequencing5
- High-throughput sequencing5
- NGS5
- NGS data analysis5
- Next gen sequencing5
- Next generation sequencing5
- Panels5
- Personal genomics5
- Primer walking5
- Research data archiving5
- Sanger sequencing5
- Sequencing5
- Single-cell genomics5
- Single-cell sequencing5
- Synthetic genomics5
- Targeted next-generation sequencing panels5
- Viral genomics5
- Whole genomes5
- Applied ontology4
- Ontologies4
- Ontology4
- Show N_FILTERS more
- Tool
- Data Stewardship Wizard7
- RDMkit3
- RStudio3
- European Nucleotide Archive (ENA)1
- Ontology Lookup Service1
- Zooma1
- Show N_FILTERS more
- Standard database or policy
- European Nucleotide Archive1
- FAIR sharing1
- FAIRsharing1
- RDA DMP Common Standard for Machine-Actionable Data Management Plans1
- Show N_FILTERS more
- Content provider
- Elixir TeSS298
- ESRF – European Synchrotron Radiation Facility59
- PaN Learning48
- Central European Research Infrastructure Consortium (CERIC-ERIC)39
- ExPaNDS35
- NEPHEWS project21
- SOLEIL15
- Institut Laue-Langevin (ILL)9
- Helmholtz-Zentrum Dresden-Rossendorf (HZDR)7
- PaNOSC7
- Deutsches Elektronen-Synchrotron (DESY)6
- Paul Scherrer Institute (PSI)6
- MAX IV5
- Diamond Light Source4
- European XFEL3
- ALBA2
- Digital Research Academy2
- ESS – European Spallation Source2
- Stanford Synchrotron Radiation Lightsource2
- Committee Research with Neutrons (KFN)1
- ELIXIR Test1
- Elettra1
- League of advanced European Neutron Sources (LENS)1
- Show N_FILTERS more
- Keyword
- Python143
- biodiversity73
- FAIR data63
- FAIR54
- microgalaxy51
- metadata44
- work-in-progress42
- Data management41
- jupyter-notebook40
- R34
- research data management33
- elixir32
- PaNOSC31
- jbrowse131
- gmod30
- expands29
- data management28
- prokaryote26
- tomography26
- Data science23
- one-health23
- covid1922
- tomwer22
- NEPHEWS project21
- NFDI4Chem21
- fair21
- ai-ml20
- nabu20
- plants20
- tomotools20
- Data management planning19
- Reproducibility19
- data management plan19
- Machine learning18
- eukaryote18
- introduction18
- python-modular18
- Data reuse17
- NFDI4Biodiversity and GfÖ Winter School 202217
- ecologyanalysis17
- interactive-tools17
- FAIR Data16
- NFDI16
- PaN16
- canvas15
- research data15
- open data14
- synchrotron14
- Online Repository13
- cyoa13
- earth-system13
- paper-replication13
- wp2-ExPaNDS13
- wp3-ExPaNDS13
- Data mining12
- Data processing12
- Photon and Neutron12
- assembly12
- data stewardship12
- discovery12
- fair-data12
- pedagogy12
- train-the-trainers12
- Clinical data11
- DMP11
- Data visualization11
- MIGHTS11
- Ontology11
- Photon science11
- Research Data Management11
- SciCat11
- eLabFTW11
- id-quant11
- next-steps11
- virology11
- workflows11
- Data10
- Large Language Model10
- RDM10
- application profile10
- clinical-metaproteomics10
- gai-llm10
- label-TMT1110
- nanopore10
- CONVERGE9
- DDA9
- Data Management9
- Data analysis9
- Data sharing9
- FAIR Data, Workflows, and Research9
- Metadata9
- NeXus9
- Python biologists9
- Statistics9
- TANGO9
- advanced9
- analyses9
- data life cycle9
- illumina9
- label-free9
- Show N_FILTERS more
- Difficulty level
- Not specified1449
- Beginner69
- Intermediate24
- Advanced11
- Show N_FILTERS more
- Licence
- License Not Specified1381
- Creative Commons Attribution 4.0 International115
- Creative Commons Attribution Share Alike 4.0 International49
- MIT License35
- Creative Commons Attribution Non Commercial Share Alike 4.0 International7
- Creative Commons Attribution Non Commercial 4.0 International5
- Creative Commons Zero v1.0 Universal5
- Apache License 2.04
- BSD 3-Clause "New" or "Revised" License4
- GNU General Public License v3.0 only3
- GNU Affero General Public License v3.0 only2
- BSD 2-Clause "Simplified" License1
- Creative Commons Attribution Non Commercial No Derivatives 4.0 International1
- European Union Public License 1.11
- Open Data Commons Attribution License v1.01
- The Unlicense1
- Show N_FILTERS more
- Target audience
- PaN Community63
- PhD students48
- PaN users37
- PhD candidate26
- Scientific community25
- beamtime users, researchers, PhD students21
- scientists21
- ExPaNDS and PaNOSC project members15
- researchers15
- Bioinformaticians14
- Data Managers14
- Data Scientists14
- PhD candidates14
- Research Scientists12
- Biomedical Researchers11
- Researcher in life sciences10
- Scientists10
- beamline users10
- research data scientist9
- general public8
- Biologists7
- data curator7
- research data engineer7
- Biologists, Genomicists, Computer Scientists6
- Materials scientists6
- beginner bioinformaticians6
- data managers6
- engineers6
- Photon Community5
- bioinformaticians4
- chemists4
- facility staff4
- industry4
- life scientists4
- Clinicians3
- Researchers3
- archaeologists3
- biologists3
- crystallography3
- instrument scientist3
- masters students3
- material scientists3
- neutron community3
- Chemists2
- Data stewards2
- Ontologists2
- PhD Students2
- Physicists2
- Post Docs2
- Undergraduate students2
- physicists2
- policy officer2
- programmers2
- project manager2
- spectroscopy2
- researchers in energy materials1
- Beginner1
- Bench biologists1
- Bioinformatician1
- Bioinformatician, Bioanalysts1
- Biomedical researchers1
- Computational biologists1
- Developers1
- ECR1
- IT support1
- Librarians1
- Life Science Researchers1
- Life Scientists1
- Life scientists1
- Life scientists, bioinformaticians and researchers who are familiar with writing Python code and core Python elements, and would like to use it in their daily data exploration and visualization tasks.1
- PhD1
- PhD Scholars, Graduates and Post Graduates, Professors, Associate Professors, Assistant Professors, Bio instruments Professionals, Bio-informatics Professionals, Directors, CEO’s of Organizations, Supply Chain companies, Manufacturing Companies, Software development companies, Research Institutes and members1
- PhD students in Genomics datascience1
- Principal Investigators1
- Principal Investigators (PIs)1
- Research scientists1
- Students1
- Trainers1
- archaeologist1
- biochemists1
- computational scientists1
- data manager1
- experts / scientists in heritage sciences1
- graduate students1
- librarians1
- medical researchers1
- operational manager1
- paleontologists1
- post-docs1
- postdocs1
- research scientists1
- researchers in energy materials1
- scientific1
- software developers1
- software engineers1
- students1
- Show N_FILTERS more
- Author
- Donat Agosti24
- Julia Giora24
- Plazi Verein24
- The Carpentries Incubator13
- Mijke Jetten12
- Personalized Health Informatics Group12
- SIB Swiss Institute of Bioinformatics9
- Celia van Gelder8
- allegra.via Via7
- Vasundra Touré6
- MolSSI Education4
- ELIXIR Europe Training3
- Erik Hedman3
- Fred Hutch Data Science Lab3
- NBIS - National Bioinformatics Infrastructure Sweden3
- Nadia Tonello3
- Niclas Jareborg3
- Sundeep Agarwal3
- posit-dev3
- Allen Downey2
- AstraZeneca2
- Data Carpentry2
- Deepak Unni2
- Egon Willighagen2
- Elin Kronander2
- Federico Bianchini2
- Giovanni Pizzi2
- Google2
- Health Data Science Sandbox2
- Institut Français de Bioinformatique (IFB)2
- Instituto Gulbenkian de Ciência2
- Jake Vanderplas2
- Jessica Lindvall2
- Laura Portell Silva2
- Markus Englund2
- Mattias Strömberg2
- Nazeefa Fatima2
- Nicola Marzari2
- Nikola Vasiljevic2
- Oliver Knodel (HZDR)2
- Paul Tafforeau2
- Petar Horki2
- Philip Krauss2
- PyMC Labs2
- Scott Reed2
- Sergio Martínez Cuesta2
- Stephan Nylinder2
- Teaching materials at the Harvard Chan Bioinformatics Core2
- The Gulbenkian Training Programme in Bioinformatics2
- Theis Lab2
- UC Davis Bioinformatics Core Training Page2
- Yvonne Kallberg2
- cambiotraining2
- posit::conf(2024)2
- @SUNET1
- @UTAustin1
- @foss421
- @posit-dev1
- @posit-pbc1
- @pydantic1
- @rstudio @UBC-DSCI @UBC-MDS1
- Alex Hall1
- Alexander Botzki1
- Aliaksandr V. Yakutovich1
- Allegra Via1
- Allyson Lister1
- Ana M. P. Melo1
- Anastasia Chasapi1
- Andres Ortega-Guerrero1
- Andrew Gotz (ESRF)1
- Ankit Mahato1
- Arthur Goldberg1
- Avans Hogeschool1
- BioINForm1
- BioRDM1
- BiotrAIn1
- Brett Olivier1
- Bruna Piereck1
- Carlo A. Pignedoli1
- Cees Hof1
- Celia W.G. van Gelder1
- Charles Severance1
- Charles Tapley Hoyt1
- Christopher J. Sewell1
- Claire Walsh1
- Common Fund Data Ecosystem1
- Dan Chitwood1
- Daniel Chen1
- Daniel Faria1
- Daniel Hollas1
- Daniel Wibberg1
- Data Science in Practice1
- David Palecek1
- Dayane Araujo1
- Deborah Prezzi1
- Decathlon Digital - @dktunited1
- Dietmar Hertsen1
- Dipl.-Inform. Bernd Klein1
- Dominic Waithe1
- Dou Du1
- Show N_FILTERS more
- Contributor
- The Carpentries Incubator13
- SIB Swiss Institute of Bioinformatics9
- Elin Kronander8
- Sabine Österle8
- Wolmar Nyberg Åkerström8
- Markus Englund7
- Mattias Strömberg7
- Stephan Nylinder7
- Yvonne Kallberg7
- Erik Hedman6
- Niclas Jareborg6
- MolSSI Education4
- ELIXIR Europe Training3
- Fred Hutch Data Science Lab3
- NBIS - National Bioinformatics Infrastructure Sweden3
- Sundeep Agarwal3
- Vasundra Touré3
- posit-dev3
- Allen Downey2
- AstraZeneca2
- Data Carpentry2
- Google2
- Guillaume Gaisne2
- Health Data Science Sandbox2
- Institut Français de Bioinformatique (IFB)2
- Instituto Gulbenkian de Ciência2
- Jake Vanderplas2
- Laura Portell Silva2
- PyMC Labs2
- Scott Reed2
- Sergio Martínez Cuesta2
- Teaching materials at the Harvard Chan Bioinformatics Core2
- The Gulbenkian Training Programme in Bioinformatics2
- Theis Lab2
- UC Davis Bioinformatics Core Training Page2
- cambiotraining2
- posit::conf(2024)2
- @SUNET1
- @UTAustin1
- @foss421
- @posit-dev1
- @posit-pbc1
- @pydantic1
- @rstudio @UBC-DSCI @UBC-MDS1
- Alex Hall1
- Ankit Mahato1
- Anthony Bretaudeau1
- Barbara Magagna1
- BioINForm1
- BiotrAIn1
- Charles Severance1
- Christof De Bo1
- Common Fund Data Ecosystem1
- Cymon Cox1
- Dan Chitwood1
- Daniel Chen1
- Data Science in Practice1
- David Stansby1
- Decathlon Digital - @dktunited1
- Dominic Waithe1
- ELIXIR Europe1
- ELIXIR-CONVERGE WP2 members1
- ELIXIR-Norway Training1
- Emil Hvitfeldt1
- FAIR-by-Design-Methodology1
- FAIRplus1
- Firas Zemzem1
- Fredrik Bolmsten (ESS)1
- Gareth Murphy (ESS)1
- Girls Who Code at U-M DCMB1
- Gray Lab1
- Greg Malcolm1
- Guillaume Gautier1
- Hacking for Science1
- Hamel Husain1
- Helena Rasche1
- Icahn School of Medicine at Mount Sinai1
- Inria1
- Insee1
- Janina Müller1
- Jeffrey Hu1
- Jose A Dianes1
- João Ventura1
- Kevin Heavey1
- Kushal Das1
- Kyran Dale1
- Leighton Pritchard1
- LiaPlayground1
- Lino Galiana1
- Liquid AI1
- Marius van den Beek1
- Max Planck Institute for Astronomy1
- Maxime Labonne1
- Michael Pyrcz1
- Michigan State University1
- NFDI4BIOIMAGE1
- NIAID BCBB1
- Navid Nobani1
- Neuromatch Academy1
- OBOAcademy1
- Show N_FILTERS more
- Resource type
- video148
- e-learning63
- Moodle course48
- Slidedeck29
- slides24
- lessons23
- service19
- Video18
- Document17
- Presentation12
- git12
- Training materials9
- tool9
- E-learning8
- jupyter notebook7
- E-Learning3
- Mock data3
- PDF3
- Tutorial3
- documenation3
- software3
- tutorial3
- workflow3
- Git2
- Poster2
- Recorded webinar2
- github2
- slideck/ presentation2
- wiki2
- youtube video2
- API reference1
- E-learning + workshop1
- Git Project1
- Jupyter notebook1
- Learning pathway1
- Slides1
- Training materials with mock data1
- community site1
- docker1
- docker-compose1
- examples1
- forum1
- game1
- hands-on tutorial1
- lesson1
- pdf1
- project deliverable1
- scientific article1
- scripts1
- slides / presentation1
- training1
- tutorials1
- Show N_FILTERS more
- Related resource
- The Carpentries7
- 2nd PaN EOSC Symposium6
- Slides5
- Associated deliverable on the ExPaNDS ontologies3
- MAX IV youtube channel3
- Part 33
- Part 43
- DMPonline2
- McStas2
- Part 22
- Part 52
- Part 62
- Part 72
- Part 82
- Part 92
- ALBA's youtube channel1
- Assessing the FAIRness of a prototypical PaN instrument at BESSY II Talk (slides)1
- Booklet of presentations1
- Browse the PaNET ontology in BioPortal1
- Colloquia list1
- DCAT V21
- DMP Template for facility users1
- DMPs for Photon and Neutron RIs1
- Demeter github1
- Demeter github.io1
- Documentation1
- Download1
- EOSC Symposium 2022 plenary1
- EXAFS ESRF course (in French)1
- ExPaNDS Librarian Symposium Report and presentations1
- Expands site1
- FAIRplus FAIRification wizard1
- GenX in command line (jupyter notebook)1
- GitHub1
- ICAT documentation1
- ICAT search API implementation1
- Index page1
- International X-ray Absorption Society site1
- Jupyter Notebook1
- Jupyter Notebook (with Solutions)1
- Jupyter Notebook (without Solutions)1
- LENS page1
- Librarian Symposium (PM session)1
- Light for cultural heritage1
- Light for food1
- Light for health1
- Light for health (Hepatitis C)1
- Light for the environment1
- Main tuto homepage1
- Main tuto page1
- Materials on OSF 1
- McXtrace1
- NOBUGS 2022 indico (slides)1
- NeXus Data Format1
- OpenRefine1
- Overview of the Symposium1
- PaNET on BioPortal1
- PaNET on GitHub1
- PaNET ontology documentation1
- Part 101
- Part 2/31
- Part 2a1
- Part 2b1
- Part 3/31
- PyMca home page1
- RDMO project website1
- RDMkit1
- Reference search API implementation1
- Reference search-api integration1
- Remote experiments at BioMAX1
- Report and presentations1
- SciCat GitHub1
- SciCat deployment example1
- SciCat documentation1
- SciCat search API implementation1
- SciCat search-api code integration example1
- Scientific article1
- TELBE workflow1
- Training workflow1
- UmbrellaID Workshop : 3rd of May, github1
- Video recording1
- Workshop FAIR & Data stewardship for the 2020 ITN ProEVLifeCycle1
- Workshop FAIR & Data stewardship for the 2021 ITN ProEVLifeCycle1
- XAS education materials1
- XRR with GenX understanding the parameters (jupyter notebook)1
- h5web documentation1
- iFit homepage1
- npm h5web app package1
- npm h5web lib package1
- pan-ontologies-api requirements1
- xfel site1
- Show N_FILTERS more
- Collection
- PaNOSC Node Service Collection19
- Show N_FILTERS more
- Status
- Active84
- Under development1
- Show N_FILTERS more
Only show materials from current space
Show disabled materials
Hide materials with broken links
Show archived materials
- Date added
- In the last 24 hours
- In the last 1 week
- In the last 1 month

Training materials

Include broken links: true

and Across all spaces: true

1617 materials found

Filter

Sort

Filter Clear filters

Training materials

Submitting sequence data to ENA

Unicycler assembly of SARS-CoV-2 genome with preprocessing to remove human genome reads

Virtual screening of the SARS-CoV-2 main protease with rxDock and pose scoring

Creating Slides

Updating tool versions in a tutorial

Single Cell Publication - Data Plotting

Creating content in Markdown

Single Cell Publication - Data Analysis

Creating a new tutorial

FAIR Galaxy Training Material