Training eSupport System
  • Log In
    • Log in with UmbrellaID
    • Log in with Helmholtz AAI
    • Login
  • About
  • Events
  • Materials
  • Workflows
  • Collections
  • Learning paths
  • Spaces
  • Directory
    • Providers

PaN-Training makes use of some necessary cookies to provide its core functionality.

See our Privacy Policy for more information.

You can modify your cookie preferences at any time here, or from the link in the footer.

Allow necessary cookies
  1. Home
  2. Materials

Filter

  • Sort

  • Filter Clear filters

    • Scientific topic
    • Comparative transcriptomics8
    • Transcriptome8
    • Transcriptomics8
    • MicroRNA sequencing7
    • RNA sequencing7
    • RNA-Seq7
    • RNA-Seq analysis7
    • Small RNA sequencing7
    • Small RNA-Seq7
    • Small-Seq7
    • Transcriptome profiling7
    • WTSS7
    • Whole transcriptome shotgun sequencing7
    • miRNA-seq7
    • Single-cell genomics5
    • Single-cell sequencing5
    • FAIR data2
    • Findable, accessible, interoperable, reusable data2
    • Bioinformatics1
    • Chromosome walking1
    • Clone verification1
    • DNA-Seq1
    • DNase-Seq1
    • Data rendering1
    • Data visualisation1
    • Enrichment1
    • Enrichment analysis1
    • Functional enrichment1
    • High throughput sequencing1
    • High-throughput sequencing1
    • NGS1
    • NGS data analysis1
    • Next gen sequencing1
    • Next generation sequencing1
    • Over-representation analysis1
    • Panels1
    • Pipelines1
    • Primer walking1
    • R markdown1
    • Sanger sequencing1
    • Sequencing1
    • Software integration1
    • Targeted next-generation sequencing panels1
    • Tool integration1
    • Tool interoperability1
    • Variant pattern analysis1
    • Workflows1
    • Show N_FILTERS more
    • Tool
    • BioContainers1
    • Bioconductor1
    • DESeq1
    • Enrichr1
    • FastQC1
    • GSEA1
    • MultiQC1
    • Nextflow1
    • QualiMap1
    • RStudio1
    • SAMtools1
    • STAR1
    • Salmon1
    • Trim Galore1
    • UCSC Genome Browser1
    • biomaRt1
    • ggplot21
    • nf-core-rnaseq1
    • Show N_FILTERS more
    • Content provider
    • Elixir TeSS8
    • Show N_FILTERS more
    • Keyword
    • Python138
    • biodiversity73
    • FAIR data63
    • microgalaxy51
    • FAIR50
    • Data management47
    • metadata43
    • work-in-progress42
    • jupyter-notebook40
    • PaNOSC33
    • R33
    • elixir32
    • jbrowse131
    • gmod30
    • research data management29
    • expands27
    • data management26
    • prokaryote26
    • tomography26
    • Data reuse25
    • Reproducibility24
    • one-health23
    • Data science22
    • Research Data Management22
    • covid1922
    • tomwer22
    • NEPHEWS project21
    • fair21
    • ai-ml20
    • nabu20
    • plants20
    • tomotools20
    • Data management planning19
    • NFDI4Chem19
    • data management plan19
    • FAIR principles18
    • Machine learning18
    • eukaryote18
    • introduction18
    • python-modular18
    • Data sharing17
    • Metadata17
    • NFDI4Biodiversity and GfÖ Winter School 202217
    • Open Science17
    • PaN17
    • ecologyanalysis17
    • interactive-tools17
    • canvas15
    • FAIR Data14
    • NFDI14
    • Online Repository13
    • Photon science13
    • SciCat13
    • cyoa13
    • discovery13
    • earth-system13
    • paper-replication13
    • research data13
    • synchrotron13
    • wp3-ExPaNDS13
    • Data mining12
    • Data processing12
    • assembly12
    • data stewardship12
    • fair-data12
    • pedagogy12
    • train-the-trainers12
    • Clinical data11
    • DMP11
    • Data Management11
    • European research projects11
    • HemaFAIR11
    • MIGHTS11
    • Ontology11
    • Photon and Neutron11
    • eLabFTW11
    • id-quant11
    • next-steps11
    • virology11
    • workflows11
    • Data visualization10
    • Large Language Model10
    • RDM10
    • application profile10
    • clinical-metaproteomics10
    • gai-llm10
    • label-TMT1110
    • nanopore10
    • wp2-ExPaNDS10
    • CONVERGE9
    • DDA9
    • Data9
    • Data analysis9
    • FAIR Data, Workflows, and Research9
    • Python biologists9
    • RNA-seq9
    • TANGO9
    • advanced9
    • analyses9
    • data life cycle9
    • Show N_FILTERS more
    • Difficulty level
    • Not specified7
    • Beginner1
    • Show N_FILTERS more
    • Licence
    • License Not Specified5
    • Apache License 2.01
    • Creative Commons Attribution 4.0 International1
    • MIT License1
    • Show N_FILTERS more
    • Target audience
    • Biologists interested in learning about RNA-seq1
    • Show N_FILTERS more
    • Author
    • Theis Lab2
    • Anna Delgado Tejedor1
    • Fabian Andrade Lozano1
    • Health Data Science Sandbox1
    • Julia Ponomarenko1
    • Luca Cozzuto1
    • NBIS - National Bioinformatics Infrastructure Sweden1
    • SIB Swiss Institute of Bioinformatics1
    • Sarah Bonnin1
    • Teaching materials at the Harvard Chan Bioinformatics Core1
    • The Carpentries Incubator1
    • Toni Hermoso Pulido1
    • Show N_FILTERS more
    • Contributor
    • Theis Lab2
    • Antonia Taiani1
    • Health Data Science Sandbox1
    • NBIS - National Bioinformatics Infrastructure Sweden1
    • SIB Swiss Institute of Bioinformatics1
    • Teaching materials at the Harvard Chan Bioinformatics Core1
    • The Carpentries Incubator1
    • Show N_FILTERS more
    • Resource type
    • Course materials1
    • Training materials1
    • Show N_FILTERS more
    • Status
    • Active1
    • Show N_FILTERS more
  • Only show materials from current space
  • Show disabled materials
  • Show materials with broken links
  • Show archived materials
    • Date added
    • In the last 24 hours
    • In the last 1 week
    • In the last 1 month

Training materials

  • Subscribe via email

Email Subscription

Register training material

Across all spaces: true

and Keywords: Transcriptomics

8 materials found
  • Course materials, Training materials

    RNA-seq Bioinformatics Course

    • beginner
    RNA-Seq Transcriptomics Bioinformatics FAIR data Workflows BIoinformatics Nextflow RNA-seq RStudio nf-co.re
  • sib-swiss/single-cell-python-training

    Sequencing RNA-Seq Single-cell sequencing Transcriptomics Next generation sequencing Python RNA-seq
  • NBISweden/workshop-spatial

    RNA-Seq Transcriptomics Python RNA-seq Spatial transcriptomics
  • carpentries-incubator/scrna-seq-analysis

    RNA-Seq Single-cell sequencing Transcriptomics Python RNA-seq
  • theislab/single-cell-best-practices

    Single-cell sequencing Transcriptomics Python
  • theislab/single-cell-tutorial

    RNA-Seq Single-cell sequencing Transcriptomics Python RNA-seq
  • hds-sandbox/scRNASeq_course

    RNA-Seq Single-cell sequencing Transcriptomics Python R RNA-seq
  • hbctraining/Training-modules

    FAIR data Data visualisation R markdown Enrichment analysis RNA-Seq Transcriptomics Variant pattern analysis Data visualization General Python …
Training eSupport System
pan-training@hzdr.de
Imprint
Contribute
About PaN-Training
Funding & acknowledgements
Privacy
Cookie preferences
Version: 1.5.1
Source code
API documentation

The training portal for the photon & neutron community is supported through the European Union's Horizon 2020 research and innovation programme, under grant agreement 857641, 823852, the Horizon Europe Framework under grant agreement 101129751, and the consortium DAPHNE4NFDI in the context of the work of the NFDI e.V. under the DFG - project number 460248799.