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ExPaNDS

ExPaNDS is the European Open Science Cloud (EOSC) Photon and Neutron Data Service.

The ambitious ExPaNDS project is a collaboration between 10 national Photon and Neutron Research Infrastructures (PaN RIs) as well as EGI. The project aims to deliver standardised, interoperable, and integrated data sources and data analysis services for Photon and Neutron facilities.

Objectives

FAIR data principles

ExPaNDS’s ambition is to coordinate activities to enable national PaN RIs to make the majority of their data open following the FAIR principles; Findable, Accessible, Interoperable, and Reusable.

Harmonising EOSC services

ExPaNDS will allow data to be tailored to the user’s needs, and will harmonise their efforts to migrate data analysis workflows to EOSC platforms, allowing them to be shared in a uniform way.

ExPaNDS https://pan-training.eu/content_providers/expands ExPaNDS is the European Open Science Cloud (EOSC) Photon and Neutron Data Service. The ambitious ExPaNDS project is a collaboration between 10 national Photon and Neutron Research Infrastructures (PaN RIs) as well as EGI. The project aims to deliver standardised, interoperable, and integrated data sources and data analysis services for Photon and Neutron facilities. ## Objectives ### FAIR data principles ExPaNDS’s ambition is to coordinate activities to enable national PaN RIs to make the majority of their data open following the FAIR principles; Findable, Accessible, Interoperable, and Reusable. ### Harmonising EOSC services ExPaNDS will allow data to be tailored to the user’s needs, and will harmonise their efforts to migrate data analysis workflows to EOSC platforms, allowing them to be shared in a uniform way. /system/content_providers/images/000/000/005/original/cloud-1.png.webp?1638889004
Showing 35 materials out of 35. View all results.
Advanced infrastructure for PIDs in Photon and Neutron RIs

This deliverable accumulates results of ExPaNDS works on the topic of persistent identifiers (PIDs) in facilities research. It refers to the substantial effort of persistent identifiers adoption in facilities and in a larger research ecosystem, and provides a general guidance, as well as...

Keywords: persistent identifiers, wp2-ExPaNDS

Resource type: project deliverable

Advanced infrastructure for PIDs in Photon and Neutron RIs https://pan-training.eu/materials/advanced-infrastructure-for-pids-in-photon-and-neutron-ris This deliverable accumulates results of ExPaNDS works on the topic of persistent identifiers (PIDs) in facilities research. It refers to the substantial effort of persistent identifiers adoption in facilities and in a larger research ecosystem, and provides a general guidance, as well as prioritised recommendations for research information practitioners who consider going beyond the current levels of persistent identifiers adoption by photon and neutron research infrastructures. persistent identifiers, wp2-ExPaNDS facility staff scientists
Delivering data services to EOSC

Wiki page recording the ExPaNDS training workshop on data services for EOSC (06/04/2021)

Keywords: OAI-PMH, metadata, harvesting, SciCat, ICAT, B2FIND, OpenAIRE, research data, wp3-ExPaNDS

Resource type: wiki

Delivering data services to EOSC https://pan-training.eu/materials/delivering-data-services-to-eosc Wiki page recording the ExPaNDS training workshop on data services for EOSC (06/04/2021) OAI-PMH, metadata, harvesting, SciCat, ICAT, B2FIND, OpenAIRE, research data, wp3-ExPaNDS data curator research data scientist
FAIR for facilities

Video recording of the workshop providing an overview of FAIR to PaN facilities (01/10/2020)

Keywords: FAIR, research data, wp2-ExPaNDS

Resource type: video

FAIR for facilities https://pan-training.eu/materials/fair-for-facilities Video recording of the workshop providing an overview of FAIR to PaN facilities (01/10/2020) FAIR, research data, wp2-ExPaNDS PaN Community instrument scientist facility staff
The FAIR Experiment

Video recording of the workshop exploring the FAIR Experiment at PaN facilities (02/10/2020)

Keywords: FAIR, research data, data management, metadata, wp2-ExPaNDS

Resource type: video

The FAIR Experiment https://pan-training.eu/materials/the-fair-experiment Video recording of the workshop exploring the FAIR Experiment at PaN facilities (02/10/2020) FAIR, research data, data management, metadata, wp2-ExPaNDS facility staff instrument scientist
ExPaNDS D2.3: Final data policy framework for Photon and Neutron RIs

ExPaNDS deliverable D2.3: Final data policy framework for photon and neutron RIs, considers how data policies for research infrastructures providing photon and neutron facilities should be framed, in particular in the light of supporting open science and FAIR data. It builds on and revises the...

Keywords: expands, data policy, wp2-ExPaNDS

Resource type: Document

ExPaNDS D2.3: Final data policy framework for Photon and Neutron RIs https://pan-training.eu/materials/expands-d2-3-final-data-policy-framework-for-photon-and-neutron-ris ExPaNDS deliverable D2.3: Final data policy framework for photon and neutron RIs, considers how data policies for research infrastructures providing photon and neutron facilities should be framed, in particular in the light of supporting open science and FAIR data. It builds on and revises the initial policy framework presented in ExPaNDS deliverable D2.1: Draft extended data policy framework for photon and neutron RIs.To produce the final, revised version of our data policy framework, ExPaNDS undertook a series of detailed consultation meetings with all ten of our partner PaN RIs. Drawing extensively on quotes from the write ups of those conversations, this report presents the themes that emerged from the consultation, focusing especially on those that featured most often and most strongly.Based on the consultation feedback, we present a revised version of the ExPaNDS data policy framework, which now proposes 21 elements for RIs to consider when formulating data policy.Overall, the consultation provided an opportunity to engage deeply in discussion with ExPaNDS partners about data policy and policy making. The consultation feedback and the level of engagement with the consultation process itself highlight ExPaNDS partners’ strong interest in data policy. There is a clear recognition that having an appropriate data policy is fundamental to supporting good research data management. While some differing views exist, ExPaNDS partners express consensus on key fundamental aspects of the data policy framework, especially the importance of a high level commitment to FAIR data. There is also the strong recognition that flexibility in a data policy framework is vital to accommodating the diversity found across national PaN RIs.As well as incorporating the final version ExPaNDS data policy framework as a key output, our report concludes with two overarching points:Data policy diversity will remain across ExPaNDS partner facilitiesData policy is a powerful and important tool for national PaN RIs.It is clear from the consultation feedback that the ExPaNDS data policy framework is already having an impact on facilities’ plans for future work, especially around ensuring that key implementations are in place to support FAIR data. Further work within ExPaNDS, for example, around PIDs, metadata, and FAIR assessment, will provide guidance to support these activities. expands, data policy, wp2-ExPaNDS
Machine Learning-based Spectra Classification

Yue Sun presents: Machine Learning-based Spectra Classification at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021).

Scientific topics: spectroscopy

Keywords: machine learning, XFEL, FAIR, large dataset, NeXus, spectroscopy, wp5-ExPaNDS

Resource type: video, slides

Machine Learning-based Spectra Classification https://pan-training.eu/materials/machine-learning-based-spectra-classification Yue Sun presents: Machine Learning-based Spectra Classification at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021). spectroscopy machine learning, XFEL, FAIR, large dataset, NeXus, spectroscopy, wp5-ExPaNDS PaN Community scientists
DOI, FAIR and MX COVID-19 use case

Frank von Delft presents: DOI, FAIR and MX COVID-19 use case at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021).

Keywords: COVID research, FAIR, fragalysis, drug development, XChem, PDB, zenodo, wp5-ExPaNDS

Resource type: video, slides

DOI, FAIR and MX COVID-19 use case https://pan-training.eu/materials/doi-fair-and-mx-covid-19-use-case Frank von Delft presents: DOI, FAIR and MX COVID-19 use case at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021). COVID research, FAIR, fragalysis, drug development, XChem, PDB, zenodo, wp5-ExPaNDS
Photon & Neutron EOSC Symposium (November 2020)

Recording of the "Photon and Neutron EOSC Symposium" that happened on November 9th 2020.

Keywords: expands, EOSC, PaNOSC, FAIR, CXIDB, symposium

Resource type: video

Photon & Neutron EOSC Symposium (November 2020) https://pan-training.eu/materials/photon-neutron-eosc-symposium-november-2020 Recording of the "Photon and Neutron EOSC Symposium" that happened on November 9th 2020. expands, EOSC, PaNOSC, FAIR, CXIDB, symposium PaN Community ExPaNDS and PaNOSC project members
ExPaNDS mapping dcat ontology and Nexus

Different communities have developed their terminology and are maintaining their metadata schemata or lists of vocabulary. In order to facilitate sharing of data across communities and allow collaboration between heterogeneous systems, interoperability of these vocabularies is required. In ...

Keywords: expands, ontology, mapping, NeXus, DCAT, semantic integration, wp3-ExPaNDS

Resource type: git, tool

ExPaNDS mapping dcat ontology and Nexus https://pan-training.eu/materials/expands-mapping-dcat-ontology-and-nexus Different communities have developed their terminology and are maintaining their metadata schemata or lists of vocabulary. In order to facilitate sharing of data across communities and allow collaboration between heterogeneous systems, interoperability of these vocabularies is required. In order to increase data interoperability and enable data integration, these vocabularies need to be semantically integrated with other vocabularies and their terms have to be aligned. This enables the development of a common shared vocabulary. expands, ontology, mapping, NeXus, DCAT, semantic integration, wp3-ExPaNDS PaN Community
ExPaNDS D3.2: Ontologies v1.0

We present ontologies for the domain of photon and neutron (PaN) science. With the primary goal of supporting PaN FAIR data catalogue services, we have developed three ontologies: PaN experimental techniques (PaNET), an ontology of NeXus definitions (NeXusOntology), and a semantic integration...

Keywords: expands, ontology, EOSC, Photon science, experimental techniques, Neutron science, deliverable, D3.2, wp3-ExPaNDS

Resource type: Document

ExPaNDS D3.2: Ontologies v1.0 https://pan-training.eu/materials/expands-d3-2-ontologies We present ontologies for the domain of photon and neutron (PaN) science. With the primary goal of supporting PaN FAIR data catalogue services, we have developed three ontologies: PaN experimental techniques (PaNET), an ontology of NeXus definitions (NeXusOntology), and a semantic integration ontology for the PaN domain (PaNmapping). The ontologies are presented as initial versions, supported by community development workflows. The work represents deliverable D3.2 of the Horizon 2020 ExPaNDS project. expands, ontology, EOSC, Photon science, experimental techniques, Neutron science, deliverable, D3.2, wp3-ExPaNDS
Joint Public Session ExPaNDS/PaNOSC on metadata catalogues (SciCat implementation) and future perspectives

Presentations from public joint WP3 Meeting for ExPaNDS and PaNOSC, which took place in hybrid format from SOLEIL (France) and via Zoom on the 3rd November 2022. A recording of the event can be found on the ExPaNDS website: https://expands.eu/presentations/ Video recording (direct link to...

Keywords: expands, PaNOSC, open data, wp3-ExPaNDS

Resource type: slides

Joint Public Session ExPaNDS/PaNOSC on metadata catalogues (SciCat implementation) and future perspectives https://pan-training.eu/materials/work-package-3-public-meeting Presentations from public joint WP3 Meeting for ExPaNDS and PaNOSC, which took place in hybrid format from SOLEIL (France) and via Zoom on the 3rd November 2022. A recording of the event can be found on the ExPaNDS website: https://expands.eu/presentations/ Video recording (direct link to vimeo) will be available soon. expands, PaNOSC, open data, wp3-ExPaNDS data managers
Beamline FAIRness Assessment Presentation

The presentation which took place on the 15th November 2021, organised by the ExPaNDS project where Markus Kubin and Gerrit Guenther gave an overview of "Assessing the FAIRness of a prototypical PaN instrument at BESSY II".

Keywords: BESSY II, FAIR, expands, open data, wp2-ExPaNDS

Resource type: video, slides

Beamline FAIRness Assessment Presentation https://pan-training.eu/materials/beamline-fairness-assessment-presentation The presentation which took place on the 15th November 2021, organised by the ExPaNDS project where Markus Kubin and Gerrit Guenther gave an overview of "Assessing the FAIRness of a prototypical PaN instrument at BESSY II". BESSY II, FAIR, expands, open data, wp2-ExPaNDS
Librarian Symposium

Our Librarian Symposium was aimed at librarians and data managers who work with and support PaN science facilities. In particular, the symposium focused on the interface between publications and data. How can we bring these together better for the benefit of all? Where are the gaps? What do we...

Keywords: expands, open data, persistent identifiers, pid, PUMA project, publishing experiments, F-UJI tool, FAIR, FAIR metrics, wp2-ExPaNDS

Resource type: video, slides

Librarian Symposium https://pan-training.eu/materials/librarian-symposium-am-session Our Librarian Symposium was aimed at librarians and data managers who work with and support PaN science facilities. In particular, the symposium focused on the interface between publications and data. How can we bring these together better for the benefit of all? Where are the gaps? What do we need to bridge them? Watch our video recordings for the AM and PM sessions, you can also find our report and presentations below. expands, open data, persistent identifiers, pid, PUMA project, publishing experiments, F-UJI tool, FAIR, FAIR metrics, wp2-ExPaNDS librarians data managers data curator
Persistent Identifiers for Facilities Research Workshop

Our workshop on Persistent Identifiers (PIDs) reflected on practices of PIDs used in facilities research, an update on state-of-the art and recent developments about PIDs elsewhere and discussions around the actual and desired levels of PIDs adoption across facilities research lifecycle. You...

Keywords: pid, persistent identifiers, expands, wp2-ExPaNDS

Resource type: video, slides

Persistent Identifiers for Facilities Research Workshop https://pan-training.eu/materials/persistent-identifiers-for-facilities-research-workshop Our workshop on Persistent Identifiers (PIDs) reflected on practices of PIDs used in facilities research, an update on state-of-the art and recent developments about PIDs elsewhere and discussions around the actual and desired levels of PIDs adoption across facilities research lifecycle. You can read our report and view the presentations in the links below. pid, persistent identifiers, expands, wp2-ExPaNDS facility staff
Describe data by scripts for future reuse

Petr Čermák presents: Describe data by scripts for future reuse at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021).

Keywords: metadata, open data, FAIR, figshare, binder, data processing, wp5-ExPaNDS

Resource type: video, slides

Describe data by scripts for future reuse https://pan-training.eu/materials/describe-data-by-scripts-for-future-reuse Petr Čermák presents: Describe data by scripts for future reuse at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021). metadata, open data, FAIR, figshare, binder, data processing, wp5-ExPaNDS
Tomography Case Study

Kamel Madi presents: Tomography Case Study at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021).

Keywords: tomography, pid, doi, FAIR, large dataset, 3Dmagination, wp5-ExPaNDS

Resource type: video, slides

Tomography Case Study https://pan-training.eu/materials/tomography-case-study Kamel Madi presents: Tomography Case Study at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021). tomography, pid, doi, FAIR, large dataset, 3Dmagination, wp5-ExPaNDS
2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021)

Recording of the "2nd PaNOSC and ExPaNDS PaN EOSC Symposium" that happened on 26th October 2021.

Keywords: expands, EOSC, PaNOSC, FAIR, symposium, wp5-ExPaNDS

Resource type: video

2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021) https://pan-training.eu/materials/2nd-panosc-and-expands-pan-eosc-symposium-october-2021 Recording of the "2nd PaNOSC and ExPaNDS PaN EOSC Symposium" that happened on 26th October 2021. expands, EOSC, PaNOSC, FAIR, symposium, wp5-ExPaNDS PaN Community ExPaNDS and PaNOSC project members
Active DMPs for Photon and Neutron RIs

This deliverable envisions an integrated aDMP system which supports the (semi-) automated generation of DMPs by maximising reuse of information generated during the research life-cycle and also aiming to support the scientists and other stakeholders by supporting information transfer....

Keywords: expands, wp2-ExPaNDS, DMP, data management plan, data management

Resource type: Document

Active DMPs for Photon and Neutron RIs https://pan-training.eu/materials/active-dmps-for-photon-and-neutron-ris This deliverable envisions an integrated aDMP system which supports the (semi-) automated generation of DMPs by maximising reuse of information generated during the research life-cycle and also aiming to support the scientists and other stakeholders by supporting information transfer. Therefore, a data model for aDMPs focusing on the integration of information that exists before a proposal is submitted and its life-cycle integration is introduced. It relates the data model also to the template created in PaNOSC. expands, wp2-ExPaNDS, DMP, data management plan, data management PaN Community
ExPaNDS Photon and Neutron Experimental Techniques (PaNET) ontology

The Photon and Neutron Experimental Technique (PaNET) ontology provides a taxonomy of experimental techniques relevant for the Photon and Neutron (PaN) community. This ontology is being developed as part of the Work Package 3 on EOSC Data Catalogue Services for PaN national Research...

Keywords: panet, expands, ontology, experimental techniques, wp3-ExPaNDS

Resource type: git, tool

ExPaNDS Photon and Neutron Experimental Techniques (PaNET) ontology https://pan-training.eu/materials/expands-photon-and-neutron-experimental-techniques-panet-ontology The Photon and Neutron Experimental Technique (PaNET) ontology provides a taxonomy of experimental techniques relevant for the Photon and Neutron (PaN) community. This ontology is being developed as part of the Work Package 3 on EOSC Data Catalogue Services for PaN national Research Infrastructures of the ExPaNDS project. The ontology allows to add semantic tags to datasets, and other related research objects, to indicate the experimental technique(s) that was (or were) used to create them. panet, expands, ontology, experimental techniques, wp3-ExPaNDS PaN Community
Develop common rules and best practices between national RI’s and harmonize the provision of the EOSC services

Slides (and other resources) of the presentations done at this workshop. How is ExPaNDS delivering its data services to PaNOSC and EOSC? - Day 1. Data catalogues: getting our open datasets harvested by the community - Day 2. Data analysis: getting our software in the PaN software...

Keywords: expands, workshop, SciCat, ICAT, B2FIND, OpenAIRE, EOSC, OAI-PMH, data catalogue, wp1-ExPaNDS

Develop common rules and best practices between national RI’s and harmonize the provision of the EOSC services https://pan-training.eu/materials/develop-common-rules-and-best-practices-between-national-ri-s-and-harmonize-the-provision-of-the-eosc-services Slides (and other resources) of the presentations done at this workshop. How is ExPaNDS delivering its data services to PaNOSC and EOSC? - Day 1. Data catalogues: getting our open datasets harvested by the community - Day 2. Data analysis: getting our software in the PaN software catalogue, getting pipelines to run, ensuring their quality over time expands, workshop, SciCat, ICAT, B2FIND, OpenAIRE, EOSC, OAI-PMH, data catalogue, wp1-ExPaNDS PaN Community ExPaNDS and PaNOSC project members
TELBE data analysis workflow and the PaN training platform UX

Jan-Christoph Deinert presents: TELBE data analysis workflow and the PaN training platform UX at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021).

Keywords: training platform, workflow, TELBE, FAIR, data correction, wp5-ExPaNDS

Resource type: video, slides

TELBE data analysis workflow and the PaN training platform UX https://pan-training.eu/materials/telbe-data-analysis-workflow-and-the-pan-training-platform-ux Jan-Christoph Deinert presents: TELBE data analysis workflow and the PaN training platform UX at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021). training platform, workflow, TELBE, FAIR, data correction, wp5-ExPaNDS
Neutron diffraction from Boro-carbon for efficient structural analysis and defect detection

Mousumi Upadhyay Kahaly presents: Neutron diffraction from Boro-carbon for efficient structural analysis and defect detection at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021).

Scientific topics: neutron diffraction, inelastic scattering

Keywords: McStas, simulation, inelastic neutron scattering, ab-initio, neutron scattering, neutron, neutron diffraction, defect detection, structural analysis, wp5-ExPaNDS

Resource type: video, slides

Neutron diffraction from Boro-carbon for efficient structural analysis and defect detection https://pan-training.eu/materials/neutron-diffraction-from-boro-carbon-for-efficient-structural-analysis-and-defect-detection Mousumi Upadhyay Kahaly presents: Neutron diffraction from Boro-carbon for efficient structural analysis and defect detection at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021). neutron diffraction inelastic scattering McStas, simulation, inelastic neutron scattering, ab-initio, neutron scattering, neutron, neutron diffraction, defect detection, structural analysis, wp5-ExPaNDS PaN Community scientists
ExPaNDS Guidance Note: Key Policy Elements within a Photon and Neutron Research Infrastructure Data Policy Framework (revised - final version)

The text of this ExPaNDS Guidance Note is extracted from ExPaNDS deliverable [D2.3: Final data policy framework for Photon and Neutron RIs](https://doi.org/10.5281/zenodo.5205824). The Guidance Note covers the 21 elements that comprise the final version of the ExPaNDS data policy framework. These...

Keywords: data policy, expands, FAIR, wp2-ExPaNDS

Resource type: Document

ExPaNDS Guidance Note: Key Policy Elements within a Photon and Neutron Research Infrastructure Data Policy Framework (revised - final version) https://pan-training.eu/materials/expands-guidance-note-key-policy-elements-within-a-photon-and-neutron-research-infrastructure-data-policy-framework-revised-final-version The text of this ExPaNDS Guidance Note is extracted from ExPaNDS deliverable [D2.3: Final data policy framework for Photon and Neutron RIs](https://doi.org/10.5281/zenodo.5205824). The Guidance Note covers the 21 elements that comprise the final version of the ExPaNDS data policy framework. These elements fall under nine broad themes: 1. General drivers and principles 2. Roles and responsibilities 3. Scope 4. Enabling FAIR data 5. Necessary restrictions to data sharing 6. Availability of infrastructure and responsibility for costs 7. Data management planning requirements 8. Recognition and reward for data usage 9. Reporting requirements, compliance monitoring, and any possible sanctions The Guidance Note is intended as a short-form, ready-access tool for policy makers working on data policy within Photon and Neutron Research Infrastructures. For additional context around the development of the ExPaNDS data policy framework, see the D2.3 deliverable and its earlier, draft version [D2.1: Draft extended data policy framework for photon and neutron RIs](https://doi.org/10.5281/zenodo.4014811). data policy, expands, FAIR, wp2-ExPaNDS
ExPaNDS NeXusOntology

NeXusOntology: Machine-readable ontology of the NeXus definitions. The published ontology describes the NeXus standard, it does not define the standard. This ontology extracts information about NeXus classes and fields from NeXus nxdl definition files on the NeXus GitHub site. This...

Keywords: NeXus, ontology, expands, wp3-ExPaNDS

Resource type: git, tool

ExPaNDS NeXusOntology https://pan-training.eu/materials/expands-nexusontology-machine-readable-ontology-of-the-nexus-definitions NeXusOntology: Machine-readable ontology of the NeXus definitions. The published ontology describes the NeXus standard, it does not define the standard. This ontology extracts information about NeXus classes and fields from NeXus nxdl definition files on the NeXus GitHub site. This project was undertaken under ExPaNDS WP3.2. The ontology is designed to fulfil several purposes. First, it creates unique identifiers for each of the NeXus fields which would normally exist only within the namespaces of the defining NeXus classes. This is the primary goal and provides PIDs for annotation and tagging. The second purpose is to allow, via separate ontologies, NeXus fields and classes to be mapped onto equivalent or related terms defined elsewhere. Finally, we hope that this ontology, when used with a tool such as Protege, will provide a useful 'NeXus Explorer' tool to gain a quick overview of NeXus with links to official NeXus documentation. NeXus, ontology, expands, wp3-ExPaNDS PaN Community
Draft recommendations for FAIR Photon and Neutron Data Management

ExPaNDS WP2 has the objective of Enabling FAIR Data, providing guidelines, recommendation and practical experience to the project and the wider PaN community on the best practise in generating FAIR experimental data for National RIs. In order for the facility to deliver experimental data “FAIR at...

Keywords: FAIR, metadata, expands, experimental lifecycle, wp2-ExPaNDS

Resource type: Document

Draft recommendations for FAIR Photon and Neutron Data Management https://pan-training.eu/materials/draft-recommendations-for-fair-photon-and-neutron-data-management ExPaNDS WP2 has the objective of Enabling FAIR Data, providing guidelines, recommendation and practical experience to the project and the wider PaN community on the best practise in generating FAIR experimental data for National RIs. In order for the facility to deliver experimental data “FAIR at the point of leaving the facility”, the infrastructure systems and procedures involved in the facilities experimental lifecycle should be coordinated to construct and maintain the FAIRness of that data. In particular, at each stage in the experimental lifecycle, metadata and contextual information should be collected (automatically and manually) to form as complete a record as possible of the experiment so that that data can be FAIR. In this report, we give an analysis of the metadata that should be generated and recorded at each stage of the lifecycle and consider its contribution to making that data FAIR. This delivers a prioritization which we use to determine which metadata should be collected. We use that prioritization to make a series of recommendations on the types of metadata that should be collected at each stage. These recommendations give a framework for setting standards for common metadata formats and provide a basis for assessing the FAIRness of data generated by facilities. Further work will develop these draft recommendations into our final recommendations for common metadata formats and use of metadata in practice. FAIR, metadata, expands, experimental lifecycle, wp2-ExPaNDS PaN Community ExPaNDS and PaNOSC project members
Final recommendations for FAIR Photon and Neutron Data Management

The present deliverable pursues the work initiated in ExPaNDS deliverable 2.2, which established a common metadata framework for FAIR data generated in Photon and Neutron (PaN) facilities. The modalities of implementation of this framework across facilities are examined and current practices and...

Keywords: expands, wp2-ExPaNDS, FAIR, data management

Resource type: Document

Final recommendations for FAIR Photon and Neutron Data Management https://pan-training.eu/materials/final-recommendations-for-fair-photon-and-neutron-data-management The present deliverable pursues the work initiated in ExPaNDS deliverable 2.2, which established a common metadata framework for FAIR data generated in Photon and Neutron (PaN) facilities. The modalities of implementation of this framework across facilities are examined and current practices and tools for metadata capture, storage and exposure are highlighted. This work is also the occasion to examine the commonalities of the framework with other initiatives developed inside and outside ExPaNDS such as the common search API, the data catalogues (ExPaNDS WP3), the EOSC discovery platforms B2FIND and OpenAire as well as the NeXus data format. It also provides the reader with guidelines on current tools and schemata available to record provenance and digital preservation information. The essence of these discussions is summarised as a list of practical recommendations at the end. expands, wp2-ExPaNDS, FAIR, data management PaN Community
Virtual Infrastructure for Scientific Analysis (VISA) Workshop

We invite you to view our workshop – hosted jointly by ExPaNDS and PaNOSC! VISA provides remote data analysis services giving access to experimental data, analysis software, compute infrastructure and expert-user support (IT and Scientific). The online half-day Workshop is open to all external...

Keywords: VISA, expands, PaNOSC, remote data analysis services

Resource type: slides

Virtual Infrastructure for Scientific Analysis (VISA) Workshop https://pan-training.eu/materials/virtual-infrastructure-for-scientific-analysis-visa-workshop We invite you to view our workshop – hosted jointly by ExPaNDS and PaNOSC! VISA provides remote data analysis services giving access to experimental data, analysis software, compute infrastructure and expert-user support (IT and Scientific). The online half-day Workshop is open to all external stakeholders (especially scientists and IT staff but not limited to). We aim to demonstrate to beamline scientists the possibilities offered by VISA for data analysis and gathering IT staff around the table to discuss about the development and further deployment of the platform. VISA has been developed at a critical time (during the COVID-19 crisis) to answer data analysis needs and allowing remote instrument control. It provides simplified access for scientists to data analysis tools, offers remote support to users from experts and allows them to remotely control their experiments with the assistance of on-site instrument scientists. VISA allows a user to use the Remote Desktop as if they were sitting in front a data treatment workstation at the host institute and embeds JupyterLab directly accessible from the same platform interface. Initially developed at the Institut Laue-Langevin (ILL) in Grenoble, France and further deployed in the context of PaNOSC, VISA enables the PaN research infrastructures (PaN RIs) to work together on further scientific collaborations to solve 21st century challenges. The first session of the workshop showcases the implementation of VISA at the PaN RIs through ExPaNDS and PaNOSC partner’ demos and illustrate its use for scientific users and others. The second session in the afternoon focuses on presentations on VISA development and deployment (on OpenStack and other infrastructures), paving the way for a roundtable discussion on the future of VISA: sustainability and future collaborations. Video recording (direct link to vimeo) will be available soon. VISA, expands, PaNOSC, remote data analysis services
Self-evaluation Photon and Neutron RIs for FAIR data certification

This ExPaNDS project deliverable describes a FAIR self-assessment undertaken by the ten ExPaNDS partner Photon and Neutron Research Infrastructures (PaN RIs) over the three-month period July – September 2022. After reviewing selected examples of existing FAIR evaluation frameworks designed to...

Keywords: FAIR, metadata, expands, European Photon and Neutron facilities , wp2-ExPaNDS

Resource type: Document

Self-evaluation Photon and Neutron RIs for FAIR data certification https://pan-training.eu/materials/self-evaluation-photon-and-neutron-ris-for-fair-data-certification This ExPaNDS project deliverable describes a FAIR self-assessment undertaken by the ten ExPaNDS partner Photon and Neutron Research Infrastructures (PaN RIs) over the three-month period July – September 2022. After reviewing selected examples of existing FAIR evaluation frameworks designed to enable assessment at different levels (dataset, repository, and organisation), the report describes the evaluation approach adopted for the ExPaNDS FAIR self-assessment. As no existing framework met our specific need to focus on FAIR workflows and processes in PaN RIs, it was necessary to select, combine, and adapt existing frameworks. Supported by four underlying guiding principles, our approach drew heavily on the FAIR Principles, the RDA FAIR Data Maturity Model, and FAIRsFAIR’s CoreTrustSeal+FAIRenabling framework. Post-evaluation feedback from ExPaNDS partners indicated that they found the FAIR self-assessment a useful and valuable exercise for understanding current levels of FAIRness at their facilities and for articulating what implementations they have in progress or planned to support FAIR in future. A key output of the ExPaNDS FAIR evaluation is the collected self-assessment reports from the ten partner facilities. These reports are published openly and in full as part of the deliverable. In addition, the self-assessments are supplemented with some high-level observations on the state of the FAIR journey across the ExPaNDS facilities. FAIR, metadata, expands, European Photon and Neutron facilities , wp2-ExPaNDS PaN Community
FAIR Metadata Workshop

Presentation of the ExPaNDS draft metadata framework for FAIR Photon and Neutron (PaN) data.

Keywords: FAIR, metadata, wp2-ExPaNDS

Resource type: video

FAIR Metadata Workshop https://pan-training.eu/materials/fair-metadata-workshop Presentation of the ExPaNDS draft metadata framework for FAIR Photon and Neutron (PaN) data. FAIR, metadata, wp2-ExPaNDS PaN Community ExPaNDS and PaNOSC project members
Report on status, gap analysis and roadmap towards harmonised and federated metadata catalogues for EU national Photon and Neutron RIs

Report on status, gap analysis and roadmap towards harmonised and federated metadata catalogues for EU national Photon and Neutron RIs

Keywords: expands, D3.1, wp3-ExPaNDS

Resource type: Document

Report on status, gap analysis and roadmap towards harmonised and federated metadata catalogues for EU national Photon and Neutron RIs https://pan-training.eu/materials/report-on-status-gap-analysis-and-roadmap-towards-harmonised-and-federated-metadata-catalogues-for-eu-national-photon-and-neutron-ris Report on status, gap analysis and roadmap towards harmonised and federated metadata catalogues for EU national Photon and Neutron RIs expands, D3.1, wp3-ExPaNDS ExPaNDS and PaNOSC project members
Metadata Catalogue Release

Self-contained, stand-alone metadata catalogue release that facilities can download to test/try and play with.

Keywords: ICAT, SciCat, PaNOSC, data catalogue, expands, wp3-ExPaNDS

Resource type: docker, docker-compose, software, git

Metadata Catalogue Release https://pan-training.eu/materials/metadata-catalogue-release Self-contained, stand-alone metadata catalogue release that facilities can download to test/try and play with. ICAT, SciCat, PaNOSC, data catalogue, expands, wp3-ExPaNDS PaN Community ExPaNDS and PaNOSC project members engineers research data engineer
Demonstrate ICAT and SciCat released with APIs compatible with ExPaNDS federated EOSC services

Demonstration release of ICAT and SciCat with APIs compatible with ExPaNDS federated EOSC services and its connection to milestone Metadata catalogue as EOSC service in the domain of photon and neutron (PaN) science

Keywords: D3.3, wp3-ExPaNDS

Demonstrate ICAT and SciCat released with APIs compatible with ExPaNDS federated EOSC services https://pan-training.eu/materials/demonstrate-icat-and-scicat-released-with-apis-compatible-with-expands-federated-eosc-services Demonstration release of ICAT and SciCat with APIs compatible with ExPaNDS federated EOSC services and its connection to milestone Metadata catalogue as EOSC service in the domain of photon and neutron (PaN) science D3.3, wp3-ExPaNDS
PaNET implementation by the pan-ontologies-API RESTful service

The application provides a data catalogue independent implementation retrieval and processing of ontologies from an external source. Currently, only the PaNET ontology is implemented. Below is a schematic data flow depicting the role of the pan-ontologies-api.

Keywords: expands, PaNOSC, data catalogue, ontology, wp3-ExPaNDS

Resource type: git, github, Git Project

PaNET implementation by the pan-ontologies-API RESTful service https://pan-training.eu/materials/pan-ontologies-api The application provides a data catalogue independent implementation retrieval and processing of ontologies from an external source. Currently, only the PaNET ontology is implemented. Below is a schematic data flow depicting the role of the pan-ontologies-api. expands, PaNOSC, data catalogue, ontology, wp3-ExPaNDS PaN Community ExPaNDS and PaNOSC project members
ExPaNDS mid-term review

Slides of the presentations done during the ExPaNDS midterm review.

Keywords: expands

Resource type: slides

ExPaNDS mid-term review https://pan-training.eu/materials/expands-mid-term-review Slides of the presentations done during the ExPaNDS midterm review. expands ExPaNDS and PaNOSC project members
Workshop on Metadata Catalogues

Presentations from the Workshop on Metadata Catalogues, which took place virtually via Zoom on the 4th April 2022.

Keywords: data catalogue, SciCat, ICAT, expands, panet, PaNOSC, metadata, data management, data processing, wp3-ExPaNDS

Resource type: slides, video

Workshop on Metadata Catalogues https://pan-training.eu/materials/workshop-on-metadata-catalogues Presentations from the Workshop on Metadata Catalogues, which took place virtually via Zoom on the 4th April 2022. data catalogue, SciCat, ICAT, expands, panet, PaNOSC, metadata, data management, data processing, wp3-ExPaNDS data curator data managers research data engineer ExPaNDS and PaNOSC project members PaN users PaN Community
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