ExPaNDS Promotional Video
ExPaNDS making data available.
Keywords: expands, FAIR, open data, EOSC, wp6-ExPaNDS
Resource type: video
ExPaNDS Promotional Video
https://vimeo.com/637958452
https://pan-training.eu/materials/expands-promotional-video
ExPaNDS making data available.
expands, FAIR, open data, EOSC, wp6-ExPaNDS
general public
NOBUGS 2022
The 13th NOBUGS Conference was held at Paul Scherrer Institute, Villigen, Switzerland on September 19-22, 2022. The goal of the NOBUGS (New Opportunities for Better User Group Software) Conference Series is to foster collaboration and exchange between scientists and IT professionals working on...
Keywords: NOBUGS, scientific software
Resource type: video, slides
NOBUGS 2022
https://www.youtube.com/channel/UC7SUAP5KT6c5g-BaJR718BQ/videos
https://pan-training.eu/materials/nobugs-2022
The 13th NOBUGS Conference was held at Paul Scherrer Institute, Villigen, Switzerland on September 19-22, 2022. The goal of the NOBUGS (New Opportunities for Better User Group Software) Conference Series is to foster collaboration and exchange between scientists and IT professionals working on software for X-ray, neutron and muon sources from around the world.
Program Themes:
- Data acquisition systems
- Data reduction
- User interfaces
- Data catalogs/Electronic Notebooks
- Data Streaming
- Use of (commercial) Cloud Systems
- Web Tools
- Workflow Engines & Tools
- Other Relevant Topics
NOBUGS, scientific software
ExPaNDS Photon and Neutron Experimental Techniques (PaNET) ontology
The Photon and Neutron Experimental Technique (PaNET) ontology provides a taxonomy of experimental techniques relevant for the Photon and Neutron (PaN) community. This ontology is being developed as part of the Work Package 3 on EOSC Data Catalogue Services for PaN national Research...
Keywords: panet, expands, ontology, experimental techniques, wp3-ExPaNDS
Resource type: git, tool
ExPaNDS Photon and Neutron Experimental Techniques (PaNET) ontology
https://github.com/ExPaNDS-eu/ExPaNDS-experimental-techniques-ontology
https://pan-training.eu/materials/expands-photon-and-neutron-experimental-techniques-panet-ontology
The Photon and Neutron Experimental Technique (PaNET) ontology provides a taxonomy of experimental techniques relevant for the Photon and Neutron (PaN) community. This ontology is being developed as part of the Work Package 3 on EOSC Data Catalogue Services for PaN national Research Infrastructures of the ExPaNDS project.
The ontology allows to add semantic tags to datasets, and other related research objects, to indicate the experimental technique(s) that was (or were) used to create them.
panet, expands, ontology, experimental techniques, wp3-ExPaNDS
PaN Community
Develop common rules and best practices between national RI’s and harmonize the provision of the EOSC services
Slides (and other resources) of the presentations done at this workshop.
How is ExPaNDS delivering its data services to PaNOSC and EOSC?
- Day 1. Data catalogues: getting our open datasets harvested by the community
- Day 2. Data analysis: getting our software in the PaN software...
Keywords: expands, workshop, SciCat, ICAT, B2FIND, OpenAIRE, EOSC, OAI-PMH, data catalogue, wp1-ExPaNDS
Develop common rules and best practices between national RI’s and harmonize the provision of the EOSC services
https://indico.desy.de/event/29297/
https://pan-training.eu/materials/develop-common-rules-and-best-practices-between-national-ri-s-and-harmonize-the-provision-of-the-eosc-services
Slides (and other resources) of the presentations done at this workshop.
How is ExPaNDS delivering its data services to PaNOSC and EOSC?
- Day 1. Data catalogues: getting our open datasets harvested by the community
- Day 2. Data analysis: getting our software in the PaN software catalogue, getting pipelines to run, ensuring their quality over time
expands, workshop, SciCat, ICAT, B2FIND, OpenAIRE, EOSC, OAI-PMH, data catalogue, wp1-ExPaNDS
PaN Community
ExPaNDS and PaNOSC project members
TELBE data analysis workflow and the PaN training platform UX
Jan-Christoph Deinert presents: TELBE data analysis workflow and the PaN training platform UX at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021).
Keywords: training platform, workflow, TELBE, FAIR, data correction, wp5-ExPaNDS
Resource type: video, slides
TELBE data analysis workflow and the PaN training platform UX
https://zenodo.org/record/5636331/files/20211026-PaN-EOSC-Symposium2021-JanChristophDeiner-TELBE-UseCase.pdf
https://pan-training.eu/materials/telbe-data-analysis-workflow-and-the-pan-training-platform-ux
Jan-Christoph Deinert presents: TELBE data analysis workflow and the PaN training platform UX at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021).
training platform, workflow, TELBE, FAIR, data correction, wp5-ExPaNDS
Neutron diffraction from Boro-carbon for efficient structural analysis and defect detection
Mousumi Upadhyay Kahaly presents: Neutron diffraction from Boro-carbon for efficient structural analysis and defect detection at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021).
Scientific topics: neutron diffraction, inelastic scattering
Keywords: McStas, simulation, inelastic neutron scattering, ab-initio, neutron scattering, neutron, neutron diffraction, defect detection, structural analysis, wp5-ExPaNDS
Resource type: video, slides
Neutron diffraction from Boro-carbon for efficient structural analysis and defect detection
https://zenodo.org/record/5636331/files/20211026-PaN-EOSC-Symposium2021-MousumiUpadhyayKahaly-UseCase.pdf?download=1
https://pan-training.eu/materials/neutron-diffraction-from-boro-carbon-for-efficient-structural-analysis-and-defect-detection
Mousumi Upadhyay Kahaly presents: Neutron diffraction from Boro-carbon for efficient structural analysis and defect detection at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021).
neutron diffraction
inelastic scattering
McStas, simulation, inelastic neutron scattering, ab-initio, neutron scattering, neutron, neutron diffraction, defect detection, structural analysis, wp5-ExPaNDS
PaN Community
scientists
Machine Learning-based Spectra Classification
Yue Sun presents: Machine Learning-based Spectra Classification at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021).
Scientific topics: spectroscopy
Keywords: machine learning, XFEL, FAIR, large dataset, NeXus, spectroscopy, wp5-ExPaNDS
Resource type: video, slides
Machine Learning-based Spectra Classification
https://zenodo.org/record/5636331/files/20211026-PaN-EOSC-Symposium2021-YueSun-UseCase.pdf?download=1
https://pan-training.eu/materials/machine-learning-based-spectra-classification
Yue Sun presents: Machine Learning-based Spectra Classification at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021).
spectroscopy
machine learning, XFEL, FAIR, large dataset, NeXus, spectroscopy, wp5-ExPaNDS
PaN Community
scientists
DOI, FAIR and MX COVID-19 use case
Frank von Delft presents: DOI, FAIR and MX COVID-19 use case at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021).
Keywords: COVID research, FAIR, fragalysis, drug development, XChem, PDB, zenodo, wp5-ExPaNDS
Resource type: video, slides
DOI, FAIR and MX COVID-19 use case
https://zenodo.org/record/5636331/files/20211026-PaN-EOSC-Symposium2021-Frank-vonDelft-DiamondMX-UseCase.pdf?download=1
https://pan-training.eu/materials/doi-fair-and-mx-covid-19-use-case
Frank von Delft presents: DOI, FAIR and MX COVID-19 use case at the 2nd PaNOSC and ExPaNDS PaN EOSC Symposium (October 2021).
COVID research, FAIR, fragalysis, drug development, XChem, PDB, zenodo, wp5-ExPaNDS
Photon & Neutron EOSC Symposium (November 2020)
Recording of the "Photon and Neutron EOSC Symposium" that happened on November 9th 2020.
Keywords: expands, EOSC, PaNOSC, FAIR, CXIDB, symposium
Resource type: video
Photon & Neutron EOSC Symposium (November 2020)
https://www.youtube.com/watch?v=AXMhurOSeiY
https://pan-training.eu/materials/photon-neutron-eosc-symposium-november-2020
Recording of the "Photon and Neutron EOSC Symposium" that happened on November 9th 2020.
expands, EOSC, PaNOSC, FAIR, CXIDB, symposium
PaN Community
ExPaNDS and PaNOSC project members
ExPaNDS mapping dcat ontology and Nexus
Different communities have developed their terminology and are maintaining their metadata schemata or lists of vocabulary. In order to facilitate sharing of data across communities and allow collaboration between heterogeneous systems, interoperability of these vocabularies is required. In ...
Keywords: expands, ontology, mapping, NeXus, DCAT, semantic integration, wp3-ExPaNDS
Resource type: git, tool
ExPaNDS mapping dcat ontology and Nexus
https://github.com/ExPaNDS-eu/ExPaNDS-nexus-dcat-mapping-ontology
https://pan-training.eu/materials/expands-mapping-dcat-ontology-and-nexus
Different communities have developed their terminology and are maintaining their metadata schemata or lists of vocabulary. In order to facilitate sharing of data across communities and allow collaboration between heterogeneous systems, interoperability of these vocabularies is required. In order to increase data interoperability and enable data integration, these vocabularies need to be semantically integrated with other vocabularies and their terms have to be aligned. This enables the development of a common shared vocabulary.
expands, ontology, mapping, NeXus, DCAT, semantic integration, wp3-ExPaNDS
PaN Community
ExPaNDS D3.2: Ontologies v1.0
We present ontologies for the domain of photon and neutron (PaN) science. With the primary goal of supporting PaN FAIR data catalogue services, we have developed three ontologies: PaN experimental techniques (PaNET), an ontology of NeXus definitions (NeXusOntology), and a semantic integration...
Keywords: expands, ontology, EOSC, Photon science, experimental techniques, Neutron science, deliverable, D3.2, wp3-ExPaNDS
Resource type: Document
ExPaNDS D3.2: Ontologies v1.0
https://doi.org/10.5281/zenodo.4806026
https://pan-training.eu/materials/expands-d3-2-ontologies
We present ontologies for the domain of photon and neutron (PaN) science. With the primary goal of supporting PaN FAIR data catalogue services, we have developed three ontologies: PaN experimental techniques (PaNET), an ontology of NeXus definitions (NeXusOntology), and a semantic integration ontology for the PaN domain (PaNmapping). The ontologies are presented as initial versions, supported by community development workflows. The work represents deliverable D3.2 of the Horizon 2020 ExPaNDS project.
expands, ontology, EOSC, Photon science, experimental techniques, Neutron science, deliverable, D3.2, wp3-ExPaNDS
Joint Public Session ExPaNDS/PaNOSC on metadata catalogues (SciCat implementation) and future perspectives
Presentations from public joint WP3 Meeting for ExPaNDS and PaNOSC, which took place in hybrid format from SOLEIL (France) and via Zoom on the 3rd November 2022.
A recording of the event can be found on the ExPaNDS website: https://expands.eu/presentations/
Video recording (direct link to...
Keywords: expands, PaNOSC, open data, wp3-ExPaNDS
Resource type: slides
Joint Public Session ExPaNDS/PaNOSC on metadata catalogues (SciCat implementation) and future perspectives
https://expands.eu/presentations/#WP3PublicMeeting
https://pan-training.eu/materials/work-package-3-public-meeting
Presentations from public joint WP3 Meeting for ExPaNDS and PaNOSC, which took place in hybrid format from SOLEIL (France) and via Zoom on the 3rd November 2022.
A recording of the event can be found on the ExPaNDS website: https://expands.eu/presentations/
Video recording (direct link to vimeo) will be available soon.
expands, PaNOSC, open data, wp3-ExPaNDS
data managers
Synchrotron SOLEIL’s contribution to Quantum Materials
Thanks to its cutting-edge instruments, Synchrotron SOLEIL contributes to the understanding of the phenomena at the origin of exceptional properties and, ultimately, to improving the performance of quantum materials for potential applications. In addition to this fundamental research, these...
Keywords: quantum materials, information storage, quantum topology, superconductivity, quantum computer
Resource type: Document
Synchrotron SOLEIL’s contribution to Quantum Materials
https://www.synchrotron-soleil.fr/contributions/QuantumMaterials/
https://pan-training.eu/materials/synchrotron-soleil-s-contribution-to-quantum-materials
Thanks to its cutting-edge instruments, Synchrotron SOLEIL contributes to the understanding of the phenomena at the origin of exceptional properties and, ultimately, to improving the performance of quantum materials for potential applications. In addition to this fundamental research, these materials are also analysed at the request of industrial researchers.
With a focus on…
• Information Storage - Increase storage density, reduce energy consumption;
• 2D quantum materials, for tomorrow’s electronics;
• Transporting energy without loss;
• Quantum Topology - Cup, donut and (among others) quantum computer.
quantum materials, information storage, quantum topology, superconductivity, quantum computer
beamline users
industry
Synchrotron SOLEIL’s contribution to Medical Diagnosis and Prognosis
In close collaboration with hospitals, Synchrotron SOLEIL takes part in the design of new methods to diagnose diseases at an early stage and seeks to better understand the evolution of pathologies. Its long-term goal is to develop more adapted treatments, while reducing health expenditures.
With...
Keywords: detection sensitivity, health, diseases, combined analysis techniques
Resource type: Document
Synchrotron SOLEIL’s contribution to Medical Diagnosis and Prognosis
https://www.synchrotron-soleil.fr/contributions/DiagnosticsAndPronostics
https://pan-training.eu/materials/synchrotron-soleil-s-contribution-to-medical-diagnosis-and-prognosis
In close collaboration with hospitals, Synchrotron SOLEIL takes part in the design of new methods to diagnose diseases at an early stage and seeks to better understand the evolution of pathologies. Its long-term goal is to develop more adapted treatments, while reducing health expenditures.
With a focus on...
• Kidney stones - Understanding how they develop, finding new diagnostic tools, and treating the disease to avoid dialysis and kidney transplant.
• Hepatic steatosis - When fat builds up in the liver - Diagnosing steatosis at an early stage. Understanding the evolution of the disease at the cell level. Determining the quality of a liver transplant before transplantation.
• Brain tumors - Providing surgeons with real-time diagnosis during tumor removal. Preserving the most important areas of the brain. Improving the survival rate and quality of life of patients who have undergone surgery.
• Wilson disease - Being able to formulate a reliable diagnosis of the disease. Proposing an efficient, simple technique for that diagnosis.
detection sensitivity, health, diseases, combined analysis techniques
beamline users
industry
Synchrotron SOLEIL’s contribution to What’s on our plates
Synchrotron SOLEIL contributes to improving the safety of food, as well as its nutritional and organoleptic qualities, notably through a strong partnership with INRAe, and by hosting researchers from major institutes and schools in the agri-food sector.
With a focus on...
• Food safety &...
Keywords: combined analysis techniques, food safety, allergens, astringency
Resource type: Document
Synchrotron SOLEIL’s contribution to What’s on our plates
https://www.synchrotron-soleil.fr/contributions/WhatsOnOurPlates/
https://pan-training.eu/materials/synchrotron-soleil-s-contribution-to-what-s-on-our-plates
Synchrotron SOLEIL contributes to improving the safety of food, as well as its nutritional and organoleptic qualities, notably through a strong partnership with INRAe, and by hosting researchers from major institutes and schools in the agri-food sector.
With a focus on...
• Food safety & allergies – Do we really know what’s on our plates?
• Milk & dairy products - Maintaining their nutritional qualities and understanding their assimilation by the body.
• Fried foods, meat and foie gras - Reducing caloric intake, optimizing cooking processes.
• The mouthfeel of astringency - Deciphering the mechanisms underlying food flavor.
combined analysis techniques, food safety, allergens, astringency
beamline users
industry
The European XFEL: start of user operation
Video from the joint ESRF-ILL colloquia.
In the past decade we have seen very important developments in the field of accelerator based X-ray user facilities, with the advent of 4th generation synchrotron sources and MHz rate free electron lasers. The first hard X-ray free-electron laser,...
Keywords: XFEL, free-electron laser
Resource type: video
The European XFEL: start of user operation
https://www.youtube.com/watch?v=JcM41wYx_Fw
https://pan-training.eu/materials/the-european-xfel-start-of-user-operation
Video from the joint ESRF-ILL colloquia.
In the past decade we have seen very important developments in the field of accelerator based X-ray user facilities, with the advent of 4th generation synchrotron sources and MHz rate free electron lasers. The first hard X-ray free-electron laser, LCLS (US) became operational in 2009 and over the last decade four additional hard X-ray FELs have begun user operation. Among these, the Eu-XFEL is the first hard XFEL powered by a superconducting linear accelerator, which enables MHz rate pulse generation. A specificity of XFELs is their very short pulse duration (10-100fs) opening new scientific opportunities to probe matter at the atomic scale, with chemical selectivity and bulk sensitivity, and at the relevant timescales.
After many years of construction, user operation at the Eu-XFEL ramped up gradually, and between 2017 and 2019 six instruments were delivered to the user community. In this talk I will first briefly introduce the present performance of the facility in terms of electron and photon beam characteristics. I will then give an overview of recent science highlights and comment on some important challenges ahead.
XFEL, free-electron laser
iFit: a simple library to analyze data
The iFit library (pronounce [eye-fit]) is a set of methods to load, analyze, plot, fit and optimize scientific data sets and models, and export results. iFit is based on Matlab, but can also be launched without Matlab license (stand-alone version).Matlab The library focuses on doing the math...
Keywords: McStas, DFT, phonons, matlab
Resource type: Git, tool
iFit: a simple library to analyze data
https://gitlab.com/soleil-data-treatment/soleil-software-projects/ifit
https://pan-training.eu/materials/ifit-a-simple-library-to-analyze-data
The iFit library (pronounce [eye-fit]) is a set of methods to load, analyze, plot, fit and optimize scientific data sets and models, and export results. iFit is based on Matlab, but can also be launched without Matlab license (stand-alone version).Matlab The library focuses on doing the math right. Any text file can be imported straight away, and a large set of binary files are supported. Any data dimensionality can be handled, including event based data sets (even though not all methods do work for these). Any model can be assembled for fitting data sets.
McStas, DFT, phonons, matlab
cif2hkl
A program that computes structure factors |F^2| for neutrons, x-rays, and electrons.
*cif2hkl* - CrysFML based utility for generating .lau/.laz files for e.g. McStas.
*Purpose* : Reads a CIF/CFL/SHX/PCR crystallographic description and generates a HKL F^2 reflection list.
Keywords: McStas, McXtrace, CrysFML, structure factor
Resource type: Git
cif2hkl
https://gitlab.com/soleil-data-treatment/soleil-software-projects/cif2hkl
https://pan-training.eu/materials/cif2hkl
A program that computes structure factors |F^2| for neutrons, x-rays, and electrons.
*cif2hkl* - CrysFML based utility for generating .lau/.laz files for e.g. McStas.
*Purpose* : Reads a CIF/CFL/SHX/PCR crystallographic description and generates a HKL F^2 reflection list.
McStas, McXtrace, CrysFML, structure factor
Beamline FAIRness Assessment Presentation
The presentation which took place on the 15th November 2021, organised by the ExPaNDS project where Markus Kubin and Gerrit Guenther gave an overview of "Assessing the FAIRness of a prototypical PaN instrument at BESSY II".
Keywords: BESSY II, FAIR, expands, open data, wp2-ExPaNDS
Resource type: video, slides
Beamline FAIRness Assessment Presentation
https://vimeo.com/647450948
https://pan-training.eu/materials/beamline-fairness-assessment-presentation
The presentation which took place on the 15th November 2021, organised by the ExPaNDS project where Markus Kubin and Gerrit Guenther gave an overview of "Assessing the FAIRness of a prototypical PaN instrument at BESSY II".
BESSY II, FAIR, expands, open data, wp2-ExPaNDS
Librarian Symposium
Our Librarian Symposium was aimed at librarians and data managers who work with and support PaN science facilities. In particular, the symposium focused on the interface between publications and data. How can we bring these together better for the benefit of all? Where are the gaps? What do we...
Keywords: expands, open data, persistent identifiers, pid, PUMA project, publishing experiments, F-UJI tool, FAIR, FAIR metrics, wp2-ExPaNDS
Resource type: video, slides
Librarian Symposium
https://vimeo.com/675857001
https://pan-training.eu/materials/librarian-symposium-am-session
Our Librarian Symposium was aimed at librarians and data managers who work with and support PaN science facilities. In particular, the symposium focused on the interface between publications and data. How can we bring these together better for the benefit of all? Where are the gaps? What do we need to bridge them?
Watch our video recordings for the AM and PM sessions, you can also find our report and presentations below.
expands, open data, persistent identifiers, pid, PUMA project, publishing experiments, F-UJI tool, FAIR, FAIR metrics, wp2-ExPaNDS
librarians
data managers
data curator
Persistent Identifiers for Facilities Research Workshop
Our workshop on Persistent Identifiers (PIDs) reflected on practices of PIDs used in facilities research, an update on state-of-the art and recent developments about PIDs elsewhere and discussions around the actual and desired levels of PIDs adoption across facilities research lifecycle.
You...
Keywords: pid, persistent identifiers, expands, wp2-ExPaNDS
Resource type: video, slides
Persistent Identifiers for Facilities Research Workshop
https://vimeo.com/676015892
https://pan-training.eu/materials/persistent-identifiers-for-facilities-research-workshop
Our workshop on Persistent Identifiers (PIDs) reflected on practices of PIDs used in facilities research, an update on state-of-the art and recent developments about PIDs elsewhere and discussions around the actual and desired levels of PIDs adoption across facilities research lifecycle.
You can read our report and view the presentations in the links below.
pid, persistent identifiers, expands, wp2-ExPaNDS
facility staff
Observation of the transition to metal hydrogen
Video from the joint ESRF-ILL colloquia.
Understanding how and when molecular solid hydrogen may transform into a metal has stimulated many theoretical works since the 30’s.
It is still an opened theoretical question and an experimental challenge. The quest for metal hydrogen has pushed major...
Keywords: metal hydrogen, high pressure, insulator-metal phase transition
Observation of the transition to metal hydrogen
https://www.youtube.com/watch?v=XVt2sOUuNh0
https://pan-training.eu/materials/observation-of-the-transition-to-metal-hydrogen
Video from the joint ESRF-ILL colloquia.
Understanding how and when molecular solid hydrogen may transform into a metal has stimulated many theoretical works since the 30’s.
It is still an opened theoretical question and an experimental challenge. The quest for metal hydrogen has pushed major developments of modern experimental high pressure physics and still various claims of its observation have remained unconfirmed. In 2020, we observed and characterized the transition to metal hydrogen near 425 GPa at 80 K [1]. Very recently, the transition to metal deuterium has also been observed, showing a significant isotopic shift in pressure. In this talk, our experimental strategy will be presented as following three steps namely:
1) Demonstrate the possibility to generate pressures well over 400 GPa ( that is the limit of the conventional Diamond Anvil Cell (DAC)) by loading hydrogen in the recently developed Toroidal-DAC[2];
2) Exhibit a reliable non-intrusive signature of the insulator-metal phase transition, i.e. total IR absorption by using the IR synchrotron radiation at SOLEIL;
3) Record combined infrared, Raman and visible observation measurements to disclose the physics at stake at the insulator-metal transition.
On-going experimental developments to further characterize the intriguing properties of metal hydrogen will be discussed.
[1] Synchrotron infra-red spectroscopic evidence of the probable transition to metal hydrogen. P. Loubeyre, F. Occelli and P. Dumas. Nature 577, 631 (2020).
[2] Toroidal diamond anvil cell for fine measurements under extreme static pressures: data on Al, Ar and Au up to 603 GPa. A. Dewaele, P. Loubeyre, F. Occelli, O. Marie and M. Mezouar. Nature Com. 9, 2913 (2018).
metal hydrogen, high pressure, insulator-metal phase transition
PyMca tutorial
A manual and a tutorial notebook on how to use PyMca to fit XRF data obtained on the beamline SIRIUS.
To use the notebook first uncompress files.zip and save.zip
Scientific topics: x-ray fluorescence
Keywords: PyMca, XRF
Resource type: pdf, git
PyMca tutorial
https://gitlab.com/soleil-data-treatment/soleil-beamlines/soleil-beamline-sirius/tutorials/tutorial_pymca/-/blob/main/PyMca_User_Manual.pdf
https://pan-training.eu/materials/pymca-tutorial
A manual and a tutorial notebook on how to use PyMca to fit XRF data obtained on the beamline SIRIUS.
To use the notebook first uncompress files.zip and save.zip
x-ray fluorescence
PyMca, XRF
Synchrotron SOLEIL’s contribution to Astrophysics & Astrochemistry
Synchrotron SOLEIL contributes to the identification and study of the electronic and molecular structure of extraterrestrial material, by reproducing reactions naturally generated by the radiation of our Sun and other stars, and by deciphering the chemical reactions that occur in planetary...
Keywords: astrophysics, astrochemistry, cosmic dust, molecules of life , Titan
Resource type: Document
Synchrotron SOLEIL’s contribution to Astrophysics & Astrochemistry
https://www.synchrotron-soleil.fr/contributions/AstrophysicsAstrochemistry
https://pan-training.eu/materials/synchrotron-soleil-s-contribution-to-astrophysics-astrochemistry
Synchrotron SOLEIL contributes to the identification and study of the electronic and molecular structure of extraterrestrial material, by reproducing reactions naturally generated by the radiation of our Sun and other stars, and by deciphering the chemical reactions that occur in planetary atmospheres and in interstellar space.
With a focus on...
• Helping to decipher signals of molecules in space.
• Cosmic dust, sources of knowledge.
• Reproducing astrophysical environments, to better understand them
• The molecules of life – delivered from space?
astrophysics, astrochemistry, cosmic dust, molecules of life , Titan
beamline users
industry
Learning pack: Synchrotron light
What are the devices and physical phenomena used to emit synchrotron light?
An educational introduction to the synchrotron sources.
Poster "Exploring matter by the light of SOLEIL"
Keywords: synchrotron light
Resource type: Poster
Learning pack: Synchrotron light
https://www.synchrotron-soleil.fr/sites/default/files/education/poster-machine-en.pdf
https://pan-training.eu/materials/learning-pack-synchrotron-light
What are the devices and physical phenomena used to emit synchrotron light?
An educational introduction to the synchrotron sources.
Poster "Exploring matter by the light of SOLEIL"
synchrotron light
general public
Learning pack: The synchrotron and its lights
The machine and beamlines, optical devices, magnetism vacuum and information about the analytic techniques applied on a synchrotron and through examples of studies carried out at the synchrotron SOLEIL.
Scientific topics: extended x-ray absorption fine structure, absorption spectroscopy
Keywords: synchrotron, optics, monochromators, magnetic fields, ultra-high vacuum, applications, xanes & exafs
Resource type: Document
Learning pack: The synchrotron and its lights
https://www.synchrotron-soleil.fr/mallettes-pedagogiques/the-synchrotron-and-its-light
https://pan-training.eu/materials/learning-pack-the-synchrotron-and-its-lights
The machine and beamlines, optical devices, magnetism vacuum and information about the analytic techniques applied on a synchrotron and through examples of studies carried out at the synchrotron SOLEIL.
extended x-ray absorption fine structure
absorption spectroscopy
synchrotron, optics, monochromators, magnetic fields, ultra-high vacuum, applications, xanes & exafs
general public
masters students
Learning pack: Optics
What optic devices are used to direct light, concentrate it and select a wavelength?
Do they all involve the same technology?
An educational introduction to optical instruments.
Poster "Optical instruments suited to the light of the SOLEIL"
Keywords: synchrotron, optical instruments
Resource type: Poster
Learning pack: Optics
https://www.synchrotron-soleil.fr/sites/default/files/education/poster-optical-instruments.pdf
https://pan-training.eu/materials/learning-pack-optics
What optic devices are used to direct light, concentrate it and select a wavelength?
Do they all involve the same technology?
An educational introduction to optical instruments.
Poster "Optical instruments suited to the light of the SOLEIL"
synchrotron, optical instruments
general public
Synchrotron, a light source for research
PART 1:
SOLEIL, a light source for research
How does a synchrotron work? Who comes here to perform experiments? Find some answers in this illustrated video.
PART 2:
The lights of SOLEIL
What lights are used at SOLEIL? Why such a diversity? Find some answers in this illustrated video, very...
Keywords: synchrotron, Soleil
Resource type: video
Synchrotron, a light source for research
https://www.youtube.com/watch?v=GwD5bZCJ1T8
https://pan-training.eu/materials/synchrotron-a-light-source-for-research
PART 1:
SOLEIL, a light source for research
How does a synchrotron work? Who comes here to perform experiments? Find some answers in this illustrated video.
PART 2:
The lights of SOLEIL
What lights are used at SOLEIL? Why such a diversity? Find some answers in this illustrated video, very accessible and didactic.
PART 3:
When light explores matter
What happens when light is shone at a sample? What techniques and applications are available at SOLEIL? Find some answers in this illustrated video, very accessible and didactic.
Find more videos on our website https://www.synchrotron-soleil.fr/en/videos
synchrotron, Soleil
general public
How to read/edit a nexus file using h5py
A tutorial notebook on how to read and edit a nexus file using h5py.
Keywords: NeXus
Resource type: git, jupyter notebook
How to read/edit a nexus file using h5py
https://gitlab.com/soleil-data-treatment/soleil-beamlines/soleil-beamline-sirius/tutorials/tutorial_edit_nexus/-/blob/main/howto_edit_nexus.ipynb
https://pan-training.eu/materials/how-to-read-edit-a-nexus-file-using-h5py
A tutorial notebook on how to read and edit a nexus file using h5py.
NeXus
GenX tutorial
howto_batch
The notebook batch_genx.ipynb details the different steps on how to use GenX with command lines.
The aim is to batch fits for XRR without the GUI. To do so we edit the .hgx files, which are just hdf5 files.
The script batch_genx.py is a condensed script without all the details...
Scientific topics: x-ray reflectivity
Keywords: GenX, jupyter notebook, XRR
Resource type: git, jupyter notebook
GenX tutorial
https://gitlab.com/soleil-data-treatment/soleil-beamlines/soleil-beamline-sirius/tutorials/tutorial_genx
https://pan-training.eu/materials/genx-tutorial
howto_batch
The notebook batch_genx.ipynb details the different steps on how to use GenX with command lines.
The aim is to batch fits for XRR without the GUI. To do so we edit the .hgx files, which are just hdf5 files.
The script batch_genx.py is a condensed script without all the details from the notebook.
howto_parameters
Explains what are the different parameters in the GUI.
x-ray reflectivity
GenX, jupyter notebook, XRR
